Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.49■□□□□ 0.71
CHMP1BQ7LBR1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP1BQ7LBR1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP1BQ7LBR1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP1BQ7LBR1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP1BQ7LBR1 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.49■□□□□ 0.71
CHMP1BQ7LBR1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP1BQ7LBR1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP1BQ7LBR1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP1BQ7LBR1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP1BQ7LBR1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP1BQ7LBR1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CHMP1BQ7LBR1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
CHMP1BQ7LBR1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP1BQ7LBR1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CHMP1BQ7LBR1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP1BQ7LBR1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.48■□□□□ 0.71
CHMP1BQ7LBR1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.48■□□□□ 0.71
CHMP1BQ7LBR1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.48■□□□□ 0.71
CHMP1BQ7LBR1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.48■□□□□ 0.71
CHMP1BQ7LBR1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.48■□□□□ 0.71
CHMP1BQ7LBR1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.48■□□□□ 0.71
CHMP1BQ7LBR1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP1BQ7LBR1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.48■□□□□ 0.71
CHMP1BQ7LBR1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP1BQ7LBR1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP1BQ7LBR1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CHMP1BQ7LBR1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP1BQ7LBR1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP1BQ7LBR1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP1BQ7LBR1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.47■□□□□ 0.71
CHMP1BQ7LBR1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP1BQ7LBR1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP1BQ7LBR1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.47■□□□□ 0.71
CHMP1BQ7LBR1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP1BQ7LBR1 BX005040.4-201ENST00000637145 1518 ntBASIC19.47■□□□□ 0.71
CHMP1BQ7LBR1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.47■□□□□ 0.71
CHMP1BQ7LBR1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
CHMP1BQ7LBR1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHMP1BQ7LBR1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.47■□□□□ 0.71
CHMP1BQ7LBR1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.47■□□□□ 0.71
CHMP1BQ7LBR1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.47■□□□□ 0.71
CHMP1BQ7LBR1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHMP1BQ7LBR1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP1BQ7LBR1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.46■□□□□ 0.71
CHMP1BQ7LBR1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CHMP1BQ7LBR1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP1BQ7LBR1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP1BQ7LBR1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP1BQ7LBR1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CHMP1BQ7LBR1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP1BQ7LBR1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP1BQ7LBR1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CHMP1BQ7LBR1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP1BQ7LBR1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP1BQ7LBR1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP1BQ7LBR1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CHMP1BQ7LBR1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP1BQ7LBR1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.45■□□□□ 0.7
CHMP1BQ7LBR1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CHMP1BQ7LBR1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP1BQ7LBR1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP1BQ7LBR1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP1BQ7LBR1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.45■□□□□ 0.7
CHMP1BQ7LBR1 SMUG1P1-201ENST00000590640 811 ntBASIC19.45■□□□□ 0.7
CHMP1BQ7LBR1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP1BQ7LBR1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.45■□□□□ 0.7
CHMP1BQ7LBR1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP1BQ7LBR1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP1BQ7LBR1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 AC079089.2-201ENST00000531211 1277 ntBASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 AC104564.3-201ENST00000582367 638 ntBASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP1BQ7LBR1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms