Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.61■■□□□ 1.21
VARS2Q5ST30 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.61■■□□□ 1.21
VARS2Q5ST30 SLC7A5P1-201ENST00000568957 537 ntBASIC22.61■■□□□ 1.21
VARS2Q5ST30 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
VARS2Q5ST30 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.61■■□□□ 1.21
VARS2Q5ST30 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VARS2Q5ST30 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
VARS2Q5ST30 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
VARS2Q5ST30 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
VARS2Q5ST30 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VARS2Q5ST30 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.61■■□□□ 1.21
VARS2Q5ST30 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VARS2Q5ST30 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.6■■□□□ 1.21
VARS2Q5ST30 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.6■■□□□ 1.21
VARS2Q5ST30 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
VARS2Q5ST30 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VARS2Q5ST30 AC080038.3-201ENST00000623346 1952 ntBASIC22.6■■□□□ 1.21
VARS2Q5ST30 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.6■■□□□ 1.21
VARS2Q5ST30 AL121832.2-201ENST00000610979 668 ntBASIC22.6■■□□□ 1.21
VARS2Q5ST30 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.6■■□□□ 1.21
VARS2Q5ST30 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VARS2Q5ST30 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VARS2Q5ST30 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.6■■□□□ 1.21
VARS2Q5ST30 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VARS2Q5ST30 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VARS2Q5ST30 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.6■■□□□ 1.21
VARS2Q5ST30 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VARS2Q5ST30 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.6■■□□□ 1.21
VARS2Q5ST30 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.59■■□□□ 1.21
VARS2Q5ST30 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VARS2Q5ST30 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VARS2Q5ST30 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
VARS2Q5ST30 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VARS2Q5ST30 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VARS2Q5ST30 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.59■■□□□ 1.21
VARS2Q5ST30 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
VARS2Q5ST30 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.59■■□□□ 1.21
VARS2Q5ST30 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
VARS2Q5ST30 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
VARS2Q5ST30 AC127496.7-201ENST00000625110 1798 ntBASIC22.58■■□□□ 1.21
VARS2Q5ST30 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VARS2Q5ST30 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
VARS2Q5ST30 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
VARS2Q5ST30 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.58■■□□□ 1.21
VARS2Q5ST30 AC083906.2-201ENST00000511578 360 ntBASIC22.58■■□□□ 1.21
VARS2Q5ST30 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.58■■□□□ 1.21
VARS2Q5ST30 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
VARS2Q5ST30 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VARS2Q5ST30 AC092053.2-201ENST00000640557 1818 ntBASIC22.58■■□□□ 1.21
VARS2Q5ST30 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
VARS2Q5ST30 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VARS2Q5ST30 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
VARS2Q5ST30 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VARS2Q5ST30 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VARS2Q5ST30 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
VARS2Q5ST30 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.57■■□□□ 1.2
VARS2Q5ST30 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VARS2Q5ST30 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.57■■□□□ 1.2
VARS2Q5ST30 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
VARS2Q5ST30 AC008175.2-201ENST00000612840 297 ntBASIC22.57■■□□□ 1.2
VARS2Q5ST30 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VARS2Q5ST30 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
VARS2Q5ST30 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.57■■□□□ 1.2
VARS2Q5ST30 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.57■■□□□ 1.2
VARS2Q5ST30 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
VARS2Q5ST30 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VARS2Q5ST30 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.56■■□□□ 1.2
VARS2Q5ST30 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.56■■□□□ 1.2
VARS2Q5ST30 TERF1P5-201ENST00000477545 1207 ntBASIC22.56■■□□□ 1.2
VARS2Q5ST30 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VARS2Q5ST30 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.56■■□□□ 1.2
VARS2Q5ST30 AC066615.1-201ENST00000640911 628 ntBASIC22.56■■□□□ 1.2
VARS2Q5ST30 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
VARS2Q5ST30 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VARS2Q5ST30 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.56■■□□□ 1.2
VARS2Q5ST30 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VARS2Q5ST30 AC003102.1-202ENST00000563394 1796 ntBASIC22.55■■□□□ 1.2
VARS2Q5ST30 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VARS2Q5ST30 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.55■■□□□ 1.2
VARS2Q5ST30 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VARS2Q5ST30 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
VARS2Q5ST30 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VARS2Q5ST30 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
VARS2Q5ST30 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.55■■□□□ 1.2
VARS2Q5ST30 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
VARS2Q5ST30 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
VARS2Q5ST30 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.55■■□□□ 1.2
VARS2Q5ST30 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.55■■□□□ 1.2
VARS2Q5ST30 AC013268.1-206ENST00000638368 961 ntBASIC22.55■■□□□ 1.2
VARS2Q5ST30 AC112229.1-201ENST00000639295 961 ntBASIC22.55■■□□□ 1.2
VARS2Q5ST30 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VARS2Q5ST30 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VARS2Q5ST30 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VARS2Q5ST30 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VARS2Q5ST30 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.55■■□□□ 1.2
VARS2Q5ST30 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VARS2Q5ST30 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
VARS2Q5ST30 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VARS2Q5ST30 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
VARS2Q5ST30 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms