Protein–RNA interactions for Protein: Q38SD2

LRRK1, Leucine-rich repeat serine/threonine-protein kinase 1, humanhuman

Predictions only

Length 2,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1Q38SD2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.14■□□□□ 0.98
LRRK1Q38SD2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.14■□□□□ 0.98
LRRK1Q38SD2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRK1Q38SD2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LRRK1Q38SD2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LRRK1Q38SD2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.14■□□□□ 0.97
LRRK1Q38SD2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.14■□□□□ 0.97
LRRK1Q38SD2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRK1Q38SD2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRRK1Q38SD2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRK1Q38SD2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.13■□□□□ 0.97
LRRK1Q38SD2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRRK1Q38SD2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
LRRK1Q38SD2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRRK1Q38SD2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRK1Q38SD2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRK1Q38SD2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRK1Q38SD2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRRK1Q38SD2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRK1Q38SD2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRRK1Q38SD2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRK1Q38SD2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.12■□□□□ 0.97
LRRK1Q38SD2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.12■□□□□ 0.97
LRRK1Q38SD2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.12■□□□□ 0.97
LRRK1Q38SD2 AL050303.2-201ENST00000619798 666 ntBASIC21.12■□□□□ 0.97
LRRK1Q38SD2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
LRRK1Q38SD2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRRK1Q38SD2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRRK1Q38SD2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRK1Q38SD2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRK1Q38SD2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
LRRK1Q38SD2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRK1Q38SD2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRK1Q38SD2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRRK1Q38SD2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.11■□□□□ 0.97
LRRK1Q38SD2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.11■□□□□ 0.97
LRRK1Q38SD2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.11■□□□□ 0.97
LRRK1Q38SD2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRRK1Q38SD2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRK1Q38SD2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.11■□□□□ 0.97
LRRK1Q38SD2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRK1Q38SD2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRRK1Q38SD2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
LRRK1Q38SD2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
LRRK1Q38SD2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.11■□□□□ 0.97
LRRK1Q38SD2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.11■□□□□ 0.97
LRRK1Q38SD2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.11■□□□□ 0.97
LRRK1Q38SD2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRRK1Q38SD2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRK1Q38SD2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRK1Q38SD2 SLC7A5P2-201ENST00000553010 536 ntBASIC21.1■□□□□ 0.97
LRRK1Q38SD2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.1■□□□□ 0.97
LRRK1Q38SD2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.1■□□□□ 0.97
LRRK1Q38SD2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRK1Q38SD2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRK1Q38SD2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRK1Q38SD2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRK1Q38SD2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRK1Q38SD2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.09■□□□□ 0.97
LRRK1Q38SD2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRK1Q38SD2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRK1Q38SD2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
LRRK1Q38SD2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRK1Q38SD2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRK1Q38SD2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRK1Q38SD2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRK1Q38SD2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LRRK1Q38SD2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.09■□□□□ 0.97
LRRK1Q38SD2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRK1Q38SD2 CROCCP5-201ENST00000436658 830 ntBASIC21.09■□□□□ 0.97
LRRK1Q38SD2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRK1Q38SD2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
LRRK1Q38SD2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.09■□□□□ 0.97
LRRK1Q38SD2 AP001160.3-201ENST00000601484 763 ntBASIC21.09■□□□□ 0.97
LRRK1Q38SD2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.08■□□□□ 0.97
LRRK1Q38SD2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRRK1Q38SD2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
LRRK1Q38SD2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRRK1Q38SD2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRRK1Q38SD2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.08■□□□□ 0.97
LRRK1Q38SD2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
LRRK1Q38SD2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRRK1Q38SD2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRRK1Q38SD2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRRK1Q38SD2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRRK1Q38SD2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
LRRK1Q38SD2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
LRRK1Q38SD2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
LRRK1Q38SD2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRK1Q38SD2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRK1Q38SD2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRK1Q38SD2 ID1-201ENST00000376105 1233 ntBASIC21.07■□□□□ 0.96
LRRK1Q38SD2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRK1Q38SD2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRK1Q38SD2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
LRRK1Q38SD2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.07■□□□□ 0.96
LRRK1Q38SD2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.07■□□□□ 0.96
LRRK1Q38SD2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
LRRK1Q38SD2 AC053503.5-201ENST00000601508 636 ntBASIC21.07■□□□□ 0.96
LRRK1Q38SD2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms