Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 FYV6YNL133C 522 nt3.98□□□□□ -1.77
SUB1P54000 FMP41YNL168C 780 nt3.98□□□□□ -1.77
SUB1P54000 YBR013CYBR013C 390 nt3.98□□□□□ -1.77
SUB1P54000 MCA1YOR197W 1299 nt3.98□□□□□ -1.77
SUB1P54000 MPS1YDL028C 2295 nt3.98□□□□□ -1.77
SUB1P54000 GCD2YGR083C 1956 nt3.98□□□□□ -1.77
SUB1P54000 DSE1YER124C 1722 nt3.98□□□□□ -1.77
SUB1P54000 SPT6YGR116W 4356 nt3.97□□□□□ -1.77
SUB1P54000 HOM2YDR158W 1098 nt3.97□□□□□ -1.77
SUB1P54000 HTD2YHR067W 843 nt3.97□□□□□ -1.77
SUB1P54000 YMR099CYMR099C 894 nt3.97□□□□□ -1.77
SUB1P54000 IRC13YOR235W 315 nt3.97□□□□□ -1.77
SUB1P54000 YOR387CYOR387C 621 nt3.97□□□□□ -1.77
SUB1P54000 HSP26YBR072W 645 nt3.97□□□□□ -1.77
SUB1P54000 EXO84YBR102C 2262 nt3.97□□□□□ -1.77
SUB1P54000 MSR1YHR091C 1932 nt3.97□□□□□ -1.77
SUB1P54000 YPS6YIR039C 1614 nt3.96□□□□□ -1.78
SUB1P54000 RMT2YDR465C 1239 nt3.96□□□□□ -1.78
SUB1P54000 TCA17YEL048C 459 nt3.96□□□□□ -1.78
SUB1P54000 CNN1YFR046C 1086 nt3.96□□□□□ -1.78
SUB1P54000 YML090WYML090W 387 nt3.96□□□□□ -1.78
SUB1P54000 TDA1YMR291W 1761 nt3.96□□□□□ -1.78
SUB1P54000 POL4YCR014C 1749 nt3.95□□□□□ -1.78
SUB1P54000 HSP30YCR021C 999 nt3.95□□□□□ -1.78
SUB1P54000 snR68snR68 136 nt3.95□□□□□ -1.78
SUB1P54000 MFA1YDR461W 111 nt3.95□□□□□ -1.78
SUB1P54000 BUD25YER014C-A 462 nt3.95□□□□□ -1.78
SUB1P54000 BOS1YLR078C 735 nt3.95□□□□□ -1.78
SUB1P54000 ATG33YLR356W 594 nt3.95□□□□□ -1.78
SUB1P54000 TPT1YOL102C 693 nt3.95□□□□□ -1.78
SUB1P54000 LOS1YKL205W 3303 nt3.95□□□□□ -1.78
SUB1P54000 APE2YKL157W 2859 nt3.95□□□□□ -1.78
SUB1P54000 YAT2YER024W 2772 nt3.95□□□□□ -1.78
SUB1P54000 SSE2YBR169C 2082 nt3.94□□□□□ -1.78
SUB1P54000 MSD1YPL104W 1977 nt3.94□□□□□ -1.78
SUB1P54000 YPR022CYPR022C 3402 nt3.94□□□□□ -1.78
SUB1P54000 UBC9YDL064W 474 nt3.94□□□□□ -1.78
SUB1P54000 YER039C-AYER039C-A 219 nt3.94□□□□□ -1.78
SUB1P54000 SEC53YFL045C 765 nt3.94□□□□□ -1.78
SUB1P54000 YGL177WYGL177W 348 nt3.94□□□□□ -1.78
SUB1P54000 MRPL9YGR220C 810 nt3.94□□□□□ -1.78
SUB1P54000 CDC12YHR107C 1224 nt3.94□□□□□ -1.78
SUB1P54000 NNF1YJR112W 606 nt3.94□□□□□ -1.78
SUB1P54000 CCS1YMR038C 750 nt3.94□□□□□ -1.78
SUB1P54000 SLX1YBR228W 915 nt3.94□□□□□ -1.78
SUB1P54000 MED1YPR070W 1701 nt3.94□□□□□ -1.78
SUB1P54000 YNL011CYNL011C 1335 nt3.94□□□□□ -1.78
SUB1P54000 AVT5YBL089W 1380 nt3.93□□□□□ -1.78
SUB1P54000 PRP22YER013W 3438 nt3.93□□□□□ -1.78
SUB1P54000 YML116W-AYML116W-A 303 nt3.93□□□□□ -1.78
SUB1P54000 PSK1YAL017W 4071 nt3.93□□□□□ -1.78
SUB1P54000 TRS120YDR407C 3870 nt3.93□□□□□ -1.78
SUB1P54000 DUF1YOL087C 3351 nt3.92□□□□□ -1.78
SUB1P54000 RPL13AYDL082W 600 nt3.92□□□□□ -1.78
SUB1P54000 MAG1YER142C 891 nt3.92□□□□□ -1.78
SUB1P54000 IGO2YHR132W-A 396 nt3.92□□□□□ -1.78
SUB1P54000 YHR182C-AYHR182C-A 474 nt3.92□□□□□ -1.78
SUB1P54000 YMR105W-AYMR105W-A 195 nt3.92□□□□□ -1.78
SUB1P54000 CDC5YMR001C 2118 nt3.92□□□□□ -1.78
SUB1P54000 MNT4YNR059W 1743 nt3.92□□□□□ -1.78
SUB1P54000 OSH3YHR073W 2991 nt3.92□□□□□ -1.78
SUB1P54000 EAP1YKL204W 1899 nt3.92□□□□□ -1.78
SUB1P54000 GIS4YML006C 2325 nt3.92□□□□□ -1.78
SUB1P54000 PDC2YDR081C 2778 nt3.91□□□□□ -1.78
SUB1P54000 RPA135YPR010C 3612 nt3.91□□□□□ -1.78
SUB1P54000 YCR016WYCR016W 873 nt3.91□□□□□ -1.78
SUB1P54000 FAD1YDL045C 921 nt3.91□□□□□ -1.78
SUB1P54000 GIC2YDR309C 1152 nt3.91□□□□□ -1.78
SUB1P54000 DIG2YDR480W 972 nt3.91□□□□□ -1.78
SUB1P54000 CCE1YKL011C 1062 nt3.91□□□□□ -1.78
SUB1P54000 RPL6BYLR448W 531 nt3.91□□□□□ -1.78
SUB1P54000 YML094C-AYML094C-A 402 nt3.91□□□□□ -1.78
SUB1P54000 MTG1YMR097C 1104 nt3.91□□□□□ -1.78
SUB1P54000 TIF4631YGR162W 2859 nt3.91□□□□□ -1.78
SUB1P54000 SEC2YNL272C 2280 nt3.9□□□□□ -1.79
SUB1P54000 LSM4YER112W 564 nt3.9□□□□□ -1.79
SUB1P54000 NSA2YER126C 786 nt3.9□□□□□ -1.79
SUB1P54000 YGL074CYGL074C 327 nt3.9□□□□□ -1.79
SUB1P54000 SPT4YGR063C 309 nt3.9□□□□□ -1.79
SUB1P54000 PSF2YJL072C 642 nt3.9□□□□□ -1.79
SUB1P54000 SOD1YJR104C 465 nt3.9□□□□□ -1.79
SUB1P54000 MRPL38YKL170W 417 nt3.9□□□□□ -1.79
SUB1P54000 SUB1YMR039C 879 nt3.9□□□□□ -1.79
SUB1P54000 DLT1YMR126C 1029 nt3.9□□□□□ -1.79
SUB1P54000 TSR4YOL022C 1227 nt3.9□□□□□ -1.79
SUB1P54000 YOR131CYOR131C 657 nt3.9□□□□□ -1.79
SUB1P54000 PEX5YDR244W 1839 nt3.9□□□□□ -1.79
SUB1P54000 NOP4YPL043W 2058 nt3.9□□□□□ -1.79
SUB1P54000 HBT1YDL223C 3141 nt3.89□□□□□ -1.79
SUB1P54000 AI3Q0060 1248 nt3.89□□□□□ -1.79
SUB1P54000 YDR230WYDR230W 348 nt3.89□□□□□ -1.79
SUB1P54000 HIS5YIL116W 1158 nt3.89□□□□□ -1.79
SUB1P54000 ACP1YKL192C 378 nt3.89□□□□□ -1.79
SUB1P54000 PRM6YML047C 1059 nt3.89□□□□□ -1.79
SUB1P54000 RHO5YNL180C 996 nt3.89□□□□□ -1.79
SUB1P54000 FRE8YLR047C 2061 nt3.88□□□□□ -1.79
SUB1P54000 CWH41YGL027C 2502 nt3.88□□□□□ -1.79
SUB1P54000 DPP1YDR284C 870 nt3.88□□□□□ -1.79
SUB1P54000 PEX14YGL153W 1026 nt3.88□□□□□ -1.79
SUB1P54000 tR(ACG)JtR(ACG)J 73 nt3.88□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 25.8 ms