Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.66■□□□□ 0.9
PDX1P52945 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
PDX1P52945 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDX1P52945 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PDX1P52945 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PDX1P52945 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDX1P52945 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDX1P52945 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PDX1P52945 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDX1P52945 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.65■□□□□ 0.9
PDX1P52945 CNN2P6-201ENST00000439038 900 ntBASIC20.65■□□□□ 0.9
PDX1P52945 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.65■□□□□ 0.9
PDX1P52945 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.65■□□□□ 0.9
PDX1P52945 AL138781.1-201ENST00000566567 1274 ntBASIC20.65■□□□□ 0.9
PDX1P52945 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PDX1P52945 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
PDX1P52945 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PDX1P52945 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PDX1P52945 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDX1P52945 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDX1P52945 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PDX1P52945 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PDX1P52945 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDX1P52945 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.64■□□□□ 0.9
PDX1P52945 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
PDX1P52945 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDX1P52945 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDX1P52945 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.64■□□□□ 0.89
PDX1P52945 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.64■□□□□ 0.89
PDX1P52945 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.64■□□□□ 0.89
PDX1P52945 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PDX1P52945 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.64■□□□□ 0.89
PDX1P52945 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.64■□□□□ 0.89
PDX1P52945 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.64■□□□□ 0.89
PDX1P52945 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.64■□□□□ 0.89
PDX1P52945 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.64■□□□□ 0.89
PDX1P52945 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.64■□□□□ 0.89
PDX1P52945 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDX1P52945 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PDX1P52945 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDX1P52945 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDX1P52945 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDX1P52945 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDX1P52945 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDX1P52945 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDX1P52945 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDX1P52945 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PDX1P52945 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDX1P52945 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.63■□□□□ 0.89
PDX1P52945 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDX1P52945 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
PDX1P52945 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDX1P52945 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.62■□□□□ 0.89
PDX1P52945 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDX1P52945 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDX1P52945 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDX1P52945 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.62■□□□□ 0.89
PDX1P52945 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDX1P52945 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.62■□□□□ 0.89
PDX1P52945 LINC01960-201ENST00000563759 1884 ntBASIC20.62■□□□□ 0.89
PDX1P52945 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDX1P52945 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDX1P52945 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PDX1P52945 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDX1P52945 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDX1P52945 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDX1P52945 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.61■□□□□ 0.89
PDX1P52945 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDX1P52945 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.61■□□□□ 0.89
PDX1P52945 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDX1P52945 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PDX1P52945 TSPY20P-201ENST00000450910 630 ntBASIC20.61■□□□□ 0.89
PDX1P52945 AC010141.2-201ENST00000452426 721 ntBASIC20.61■□□□□ 0.89
PDX1P52945 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDX1P52945 KRT18P6-201ENST00000555540 1265 ntBASIC20.61■□□□□ 0.89
PDX1P52945 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.61■□□□□ 0.89
PDX1P52945 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDX1P52945 TMEM191A-211ENST00000637163 1067 ntBASIC20.61■□□□□ 0.89
PDX1P52945 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDX1P52945 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.61■□□□□ 0.89
PDX1P52945 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDX1P52945 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDX1P52945 AL117328.2-201ENST00000624617 1940 ntBASIC20.61■□□□□ 0.89
PDX1P52945 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDX1P52945 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDX1P52945 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.6■□□□□ 0.89
PDX1P52945 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.6■□□□□ 0.89
PDX1P52945 AC079089.2-201ENST00000531211 1277 ntBASIC20.6■□□□□ 0.89
PDX1P52945 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.6■□□□□ 0.89
PDX1P52945 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDX1P52945 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDX1P52945 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDX1P52945 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PDX1P52945 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDX1P52945 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PDX1P52945 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDX1P52945 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.59■□□□□ 0.89
PDX1P52945 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.59■□□□□ 0.89
PDX1P52945 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PDX1P52945 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms