Protein–RNA interactions for Protein: P48547

KCNC1, Potassium voltage-gated channel subfamily C member 1, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1P48547 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNC1P48547 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNC1P48547 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNC1P48547 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KCNC1P48547 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KCNC1P48547 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
KCNC1P48547 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNC1P48547 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNC1P48547 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.87■□□□□ 0.93
KCNC1P48547 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KCNC1P48547 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNC1P48547 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNC1P48547 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNC1P48547 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNC1P48547 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.87■□□□□ 0.93
KCNC1P48547 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNC1P48547 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNC1P48547 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
KCNC1P48547 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNC1P48547 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNC1P48547 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.86■□□□□ 0.93
KCNC1P48547 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNC1P48547 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNC1P48547 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.86■□□□□ 0.93
KCNC1P48547 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNC1P48547 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNC1P48547 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNC1P48547 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNC1P48547 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.86■□□□□ 0.93
KCNC1P48547 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNC1P48547 AC008764.7-201ENST00000593779 1081 ntBASIC20.86■□□□□ 0.93
KCNC1P48547 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.86■□□□□ 0.93
KCNC1P48547 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
KCNC1P48547 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNC1P48547 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNC1P48547 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.86■□□□□ 0.93
KCNC1P48547 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNC1P48547 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNC1P48547 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
KCNC1P48547 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.85■□□□□ 0.93
KCNC1P48547 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNC1P48547 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.85■□□□□ 0.93
KCNC1P48547 AP006587.3-201ENST00000525742 1516 ntBASIC20.85■□□□□ 0.93
KCNC1P48547 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
KCNC1P48547 PBX2P1-201ENST00000493219 1291 ntBASIC20.85■□□□□ 0.93
KCNC1P48547 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.85■□□□□ 0.93
KCNC1P48547 AC126544.1-201ENST00000580842 1059 ntBASIC20.85■□□□□ 0.93
KCNC1P48547 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KCNC1P48547 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.85■□□□□ 0.93
KCNC1P48547 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNC1P48547 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNC1P48547 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNC1P48547 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNC1P48547 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNC1P48547 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNC1P48547 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNC1P48547 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
KCNC1P48547 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KCNC1P48547 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNC1P48547 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNC1P48547 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNC1P48547 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNC1P48547 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.84■□□□□ 0.93
KCNC1P48547 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
KCNC1P48547 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.84■□□□□ 0.93
KCNC1P48547 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNC1P48547 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
KCNC1P48547 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNC1P48547 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KCNC1P48547 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.83■□□□□ 0.93
KCNC1P48547 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
KCNC1P48547 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
KCNC1P48547 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KCNC1P48547 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNC1P48547 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.83■□□□□ 0.93
KCNC1P48547 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.83■□□□□ 0.93
KCNC1P48547 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNC1P48547 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNC1P48547 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNC1P48547 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNC1P48547 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.83■□□□□ 0.93
KCNC1P48547 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.83■□□□□ 0.93
KCNC1P48547 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
KCNC1P48547 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.83■□□□□ 0.93
KCNC1P48547 AC106739.1-201ENST00000617035 715 ntBASIC20.83■□□□□ 0.93
KCNC1P48547 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.83■□□□□ 0.92
KCNC1P48547 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
KCNC1P48547 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
KCNC1P48547 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.92
KCNC1P48547 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.92
KCNC1P48547 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.83■□□□□ 0.92
KCNC1P48547 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.83■□□□□ 0.92
KCNC1P48547 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
KCNC1P48547 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KCNC1P48547 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNC1P48547 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.82■□□□□ 0.92
KCNC1P48547 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.82■□□□□ 0.92
KCNC1P48547 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNC1P48547 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
KCNC1P48547 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms