Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 YAL034C-BYAL034C-B 354 nt3.29□□□□□ -1.88
SSN8P47821 DLT1YMR126C 1029 nt3.29□□□□□ -1.88
SSN8P47821 YBL065WYBL065W 345 nt3.29□□□□□ -1.88
SSN8P47821 snR11snR11 258 nt3.29□□□□□ -1.88
SSN8P47821 YPL035CYPL035C 348 nt3.29□□□□□ -1.88
SSN8P47821 IMH1YLR309C 2736 nt3.29□□□□□ -1.88
SSN8P47821 PDR12YPL058C 4536 nt3.29□□□□□ -1.88
SSN8P47821 URA2YJL130C 6645 nt3.29□□□□□ -1.88
SSN8P47821 UTP5YDR398W 1932 nt3.29□□□□□ -1.88
SSN8P47821 GPI1YGR216C 1830 nt3.28□□□□□ -1.88
SSN8P47821 SSU1YPL092W 1377 nt3.28□□□□□ -1.88
SSN8P47821 DSE1YER124C 1722 nt3.28□□□□□ -1.88
SSN8P47821 SET1YHR119W 3243 nt3.28□□□□□ -1.88
SSN8P47821 ATP16YDL004W 483 nt3.28□□□□□ -1.88
SSN8P47821 GPM2YDL021W 936 nt3.28□□□□□ -1.88
SSN8P47821 TLG1YDR468C 675 nt3.28□□□□□ -1.88
SSN8P47821 YGL242CYGL242C 546 nt3.28□□□□□ -1.88
SSN8P47821 AML1YGR001C 747 nt3.28□□□□□ -1.88
SSN8P47821 LST7YGR057C 729 nt3.28□□□□□ -1.88
SSN8P47821 SVP26YHR181W 687 nt3.28□□□□□ -1.88
SSN8P47821 YIL024CYIL024C 570 nt3.28□□□□□ -1.88
SSN8P47821 RPC25YKL144C 639 nt3.28□□□□□ -1.88
SSN8P47821 YKL162C-AYKL162C-A 153 nt3.28□□□□□ -1.88
SSN8P47821 ATP20YPR020W 348 nt3.28□□□□□ -1.88
SSN8P47821 DIB1YPR082C 432 nt3.28□□□□□ -1.88
SSN8P47821 SMC3YJL074C 3693 nt3.28□□□□□ -1.88
SSN8P47821 TAF1YGR274C 3201 nt3.28□□□□□ -1.88
SSN8P47821 YPS7YDR349C 1791 nt3.28□□□□□ -1.89
SSN8P47821 PHO5YBR093C 1404 nt3.27□□□□□ -1.89
SSN8P47821 FAT1YBR041W 2010 nt3.27□□□□□ -1.89
SSN8P47821 TAO3YIL129C 7131 nt3.27□□□□□ -1.89
SSN8P47821 HOM2YDR158W 1098 nt3.27□□□□□ -1.89
SSN8P47821 COG7YGL005C 840 nt3.27□□□□□ -1.89
SSN8P47821 BTN2YGR142W 1233 nt3.27□□□□□ -1.89
SSN8P47821 SPO11YHL022C 1197 nt3.27□□□□□ -1.89
SSN8P47821 IKI1YHR187W 930 nt3.27□□□□□ -1.89
SSN8P47821 MMF1YIL051C 438 nt3.27□□□□□ -1.89
SSN8P47821 SAS5YOR213C 747 nt3.27□□□□□ -1.89
SSN8P47821 CIN2YPL241C 807 nt3.27□□□□□ -1.89
SSN8P47821 RIB5YBR256C 717 nt3.27□□□□□ -1.89
SSN8P47821 YPR022CYPR022C 3402 nt3.27□□□□□ -1.89
SSN8P47821 SAG1YJR004C 1953 nt3.27□□□□□ -1.89
SSN8P47821 STE24YJR117W 1362 nt3.26□□□□□ -1.89
SSN8P47821 AIP1YMR092C 1848 nt3.26□□□□□ -1.89
SSN8P47821 YMR317WYMR317W 3423 nt3.26□□□□□ -1.89
SSN8P47821 SLM2YNL047C 1971 nt3.26□□□□□ -1.89
SSN8P47821 PDS1YDR113C 1122 nt3.26□□□□□ -1.89
SSN8P47821 YGR114CYGR114C 390 nt3.26□□□□□ -1.89
SSN8P47821 YLL037WYLL037W 381 nt3.26□□□□□ -1.89
SSN8P47821 YBL055CYBL055C 1257 nt3.26□□□□□ -1.89
SSN8P47821 YMR310CYMR310C 954 nt3.26□□□□□ -1.89
SSN8P47821 YNL303WYNL303W 348 nt3.26□□□□□ -1.89
SSN8P47821 HNT3YOR258W 654 nt3.26□□□□□ -1.89
SSN8P47821 YOR366WYOR366W 354 nt3.26□□□□□ -1.89
SSN8P47821 PPT2YPL148C 522 nt3.26□□□□□ -1.89
SSN8P47821 SPH1YLR313C 1593 nt3.25□□□□□ -1.89
SSN8P47821 MRPL11YDL202W 750 nt3.25□□□□□ -1.89
SSN8P47821 GUK1YDR454C 564 nt3.25□□□□□ -1.89
SSN8P47821 YGR064WYGR064W 369 nt3.25□□□□□ -1.89
SSN8P47821 UNG1YML021C 1080 nt3.25□□□□□ -1.89
SSN8P47821 SHH3YMR118C 591 nt3.25□□□□□ -1.89
SSN8P47821 MAK21YDR060W 3078 nt3.25□□□□□ -1.89
SSN8P47821 ISM1YPL040C 3009 nt3.25□□□□□ -1.89
SSN8P47821 TCB3YML072C 4638 nt3.24□□□□□ -1.89
SSN8P47821 RRM3YHR031C 2172 nt3.24□□□□□ -1.89
SSN8P47821 YGL082WYGL082W 1146 nt3.24□□□□□ -1.89
SSN8P47821 GTR2YGR163W 1026 nt3.24□□□□□ -1.89
SSN8P47821 CFD1YIL003W 882 nt3.24□□□□□ -1.89
SSN8P47821 YJL032WYJL032W 315 nt3.24□□□□□ -1.89
SSN8P47821 ENT3YJR125C 1227 nt3.24□□□□□ -1.89
SSN8P47821 HUB1YNR032C-A 222 nt3.24□□□□□ -1.89
SSN8P47821 OSW1YOR255W 837 nt3.24□□□□□ -1.89
SSN8P47821 FIG1YBR040W 897 nt3.24□□□□□ -1.89
SSN8P47821 YPR136CYPR136C 513 nt3.24□□□□□ -1.89
SSN8P47821 SSM4YIL030C 3960 nt3.24□□□□□ -1.89
SSN8P47821 NOG1YPL093W 1944 nt3.24□□□□□ -1.89
SSN8P47821 PPQ1YPL179W 1650 nt3.24□□□□□ -1.89
SSN8P47821 DAN4YJR151C 3486 nt3.23□□□□□ -1.89
SSN8P47821 MSR1YHR091C 1932 nt3.23□□□□□ -1.89
SSN8P47821 ROD1YOR018W 2514 nt3.23□□□□□ -1.89
SSN8P47821 PTI1YGR156W 1278 nt3.23□□□□□ -1.89
SSN8P47821 FUR1YHR128W 651 nt3.23□□□□□ -1.89
SSN8P47821 YIR014WYIR014W 729 nt3.23□□□□□ -1.89
SSN8P47821 CCE1YKL011C 1062 nt3.23□□□□□ -1.89
SSN8P47821 UTP11YKL099C 753 nt3.23□□□□□ -1.89
SSN8P47821 YPT7YML001W 627 nt3.23□□□□□ -1.89
SSN8P47821 YNL013CYNL013C 378 nt3.23□□□□□ -1.89
SSN8P47821 PRM4YPL156C 855 nt3.23□□□□□ -1.89
SSN8P47821 snR189snR189 189 nt3.23□□□□□ -1.89
SSN8P47821 CBP6YBR120C 489 nt3.23□□□□□ -1.89
SSN8P47821 RPN6YDL097C 1305 nt3.22□□□□□ -1.89
SSN8P47821 YDR261W-AYDR261W-A 1317 nt3.22□□□□□ -1.89
SSN8P47821 MSW1YDR268W 1140 nt3.22□□□□□ -1.89
SSN8P47821 YDR340WYDR340W 303 nt3.22□□□□□ -1.89
SSN8P47821 YEA4YEL004W 1029 nt3.22□□□□□ -1.89
SSN8P47821 LIP2YLR239C 987 nt3.22□□□□□ -1.89
SSN8P47821 RAD33YML011C 534 nt3.22□□□□□ -1.89
SSN8P47821 URA5YML106W 681 nt3.22□□□□□ -1.89
SSN8P47821 SUB1YMR039C 879 nt3.22□□□□□ -1.89
SSN8P47821 IMP1YMR150C 573 nt3.22□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 23.7 ms