Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 RDS2YPL133C 1341 nt3.01□□□□□ -1.93
TDA11P38854 YDR222WYDR222W 1248 nt3.01□□□□□ -1.93
TDA11P38854 tK(UUU)DtK(UUU)D 73 nt3.01□□□□□ -1.93
TDA11P38854 tK(UUU)G1tK(UUU)G1 73 nt3.01□□□□□ -1.93
TDA11P38854 tK(UUU)G2tK(UUU)G2 73 nt3.01□□□□□ -1.93
TDA11P38854 tK(UUU)KtK(UUU)K 73 nt3.01□□□□□ -1.93
TDA11P38854 tK(UUU)LtK(UUU)L 73 nt3.01□□□□□ -1.93
TDA11P38854 tK(UUU)OtK(UUU)O 73 nt3.01□□□□□ -1.93
TDA11P38854 tK(UUU)PtK(UUU)P 73 nt3.01□□□□□ -1.93
TDA11P38854 OST6YML019W 999 nt3.01□□□□□ -1.93
TDA11P38854 TRM112YNR046W 408 nt3.01□□□□□ -1.93
TDA11P38854 YPR074W-AYPR074W-A 171 nt3.01□□□□□ -1.93
TDA11P38854 MRPL27YBR282W 441 nt3.01□□□□□ -1.93
TDA11P38854 CDC20YGL116W 1833 nt3□□□□□ -1.93
TDA11P38854 MET10YFR030W 3108 nt3□□□□□ -1.93
TDA11P38854 NKP1YDR383C 717 nt3□□□□□ -1.93
TDA11P38854 PMI40YER003C 1290 nt3□□□□□ -1.93
TDA11P38854 LST7YGR057C 729 nt3□□□□□ -1.93
TDA11P38854 YHR214C-DYHR214C-D 294 nt3□□□□□ -1.93
TDA11P38854 YJR128WYJR128W 360 nt3□□□□□ -1.93
TDA11P38854 MTD1YKR080W 963 nt3□□□□□ -1.93
TDA11P38854 SIC1YLR079W 855 nt3□□□□□ -1.93
TDA11P38854 YAR069CYAR069C 294 nt3□□□□□ -1.93
TDA11P38854 RPS10AYOR293W 318 nt3□□□□□ -1.93
TDA11P38854 BUD4YJR092W 4344 nt3□□□□□ -1.93
TDA11P38854 RPS23AYGR118W 438 nt2.99□□□□□ -1.93
TDA11P38854 OMA1YKR087C 1038 nt2.99□□□□□ -1.93
TDA11P38854 YML047W-AYML047W-A 366 nt2.99□□□□□ -1.93
TDA11P38854 HHF2YNL030W 312 nt2.99□□□□□ -1.93
TDA11P38854 YPL035CYPL035C 348 nt2.99□□□□□ -1.93
TDA11P38854 PPT2YPL148C 522 nt2.99□□□□□ -1.93
TDA11P38854 RPS23BYPR132W 438 nt2.99□□□□□ -1.93
TDA11P38854 YTA7YGR270W 4140 nt2.99□□□□□ -1.93
TDA11P38854 NDT80YHR124W 1884 nt2.99□□□□□ -1.93
TDA11P38854 YLR446WYLR446W 1302 nt2.98□□□□□ -1.93
TDA11P38854 TOM1YDR457W 9807 nt2.98□□□□□ -1.93
TDA11P38854 YLR278CYLR278C 4026 nt2.98□□□□□ -1.93
TDA11P38854 RDI1YDL135C 609 nt2.98□□□□□ -1.93
TDA11P38854 YDR442WYDR442W 393 nt2.98□□□□□ -1.93
TDA11P38854 YHP1YDR451C 1062 nt2.98□□□□□ -1.93
TDA11P38854 KEG1YFR042W 603 nt2.98□□□□□ -1.93
TDA11P38854 PNC1YGL037C 651 nt2.98□□□□□ -1.93
TDA11P38854 DCG1YIR030C 735 nt2.98□□□□□ -1.93
TDA11P38854 SNX4YJL036W 1272 nt2.98□□□□□ -1.93
TDA11P38854 EMC2YJR088C 879 nt2.98□□□□□ -1.93
TDA11P38854 AIM25YJR100C 984 nt2.98□□□□□ -1.93
TDA11P38854 SDH3YKL141W 597 nt2.98□□□□□ -1.93
TDA11P38854 APC9YLR102C 798 nt2.98□□□□□ -1.93
TDA11P38854 YMR075C-AYMR075C-A 366 nt2.98□□□□□ -1.93
TDA11P38854 YMR178WYMR178W 825 nt2.98□□□□□ -1.93
TDA11P38854 YNL035CYNL035C 1170 nt2.98□□□□□ -1.93
TDA11P38854 RPN4YDL020C 1596 nt2.98□□□□□ -1.93
TDA11P38854 ENA5YDR038C 3276 nt2.98□□□□□ -1.93
TDA11P38854 PEX10YDR265W 1014 nt2.97□□□□□ -1.93
TDA11P38854 YDR535CYDR535C 501 nt2.97□□□□□ -1.93
TDA11P38854 YGR190CYGR190C 366 nt2.97□□□□□ -1.93
TDA11P38854 EPT1YHR123W 1176 nt2.97□□□□□ -1.93
TDA11P38854 SDO1YLR022C 753 nt2.97□□□□□ -1.93
TDA11P38854 YLR311CYLR311C 348 nt2.97□□□□□ -1.93
TDA11P38854 RDN58-1RDN58-1 158 nt2.97□□□□□ -1.93
TDA11P38854 RDN58-2RDN58-2 158 nt2.97□□□□□ -1.93
TDA11P38854 PEX11YOL147C 711 nt2.97□□□□□ -1.93
TDA11P38854 YBR089WYBR089W 600 nt2.97□□□□□ -1.93
TDA11P38854 TIM12YBR091C 330 nt2.97□□□□□ -1.93
TDA11P38854 NMD2YHR077C 3270 nt2.97□□□□□ -1.93
TDA11P38854 YDL199CYDL199C 2064 nt2.96□□□□□ -1.94
TDA11P38854 MSS4YDR208W 2340 nt2.96□□□□□ -1.94
TDA11P38854 YGR017WYGR017W 894 nt2.96□□□□□ -1.94
TDA11P38854 DOG1YHR044C 741 nt2.96□□□□□ -1.94
TDA11P38854 CFD1YIL003W 882 nt2.96□□□□□ -1.94
TDA11P38854 GCD14YJL125C 1152 nt2.96□□□□□ -1.94
TDA11P38854 COQ9YLR201C 783 nt2.96□□□□□ -1.94
TDA11P38854 YLR290CYLR290C 834 nt2.96□□□□□ -1.94
TDA11P38854 YLR416CYLR416C 399 nt2.96□□□□□ -1.94
TDA11P38854 IRC14YOR135C 342 nt2.96□□□□□ -1.94
TDA11P38854 SSP2YOR242C 1116 nt2.96□□□□□ -1.94
TDA11P38854 MRP2YPR166C 348 nt2.96□□□□□ -1.94
TDA11P38854 snR42snR42 351 nt2.96□□□□□ -1.94
TDA11P38854 CDC40YDR364C 1368 nt2.96□□□□□ -1.94
TDA11P38854 NUF2YOL069W 1356 nt2.96□□□□□ -1.94
TDA11P38854 ATP25YMR098C 1839 nt2.96□□□□□ -1.94
TDA11P38854 CHO2YGR157W 2610 nt2.95□□□□□ -1.94
TDA11P38854 HUL5YGL141W 2733 nt2.95□□□□□ -1.94
TDA11P38854 MIP6YHR015W 1980 nt2.95□□□□□ -1.94
TDA11P38854 DTD1YDL219W 453 nt2.95□□□□□ -1.94
TDA11P38854 YHR180WYHR180W 492 nt2.95□□□□□ -1.94
TDA11P38854 GLO1YML004C 981 nt2.95□□□□□ -1.94
TDA11P38854 EAF7YNL136W 1278 nt2.95□□□□□ -1.94
TDA11P38854 HHF1YBR009C 312 nt2.95□□□□□ -1.94
TDA11P38854 RPA43YOR340C 981 nt2.95□□□□□ -1.94
TDA11P38854 RRP7YCL031C 894 nt2.95□□□□□ -1.94
TDA11P38854 KIN82YCR091W 2163 nt2.95□□□□□ -1.94
TDA11P38854 YGR067CYGR067C 2415 nt2.94□□□□□ -1.94
TDA11P38854 VIP1YLR410W 3441 nt2.94□□□□□ -1.94
TDA11P38854 RPL35BYDL136W 363 nt2.94□□□□□ -1.94
TDA11P38854 RAD55YDR076W 1221 nt2.94□□□□□ -1.94
TDA11P38854 RRT13YER066W 558 nt2.94□□□□□ -1.94
TDA11P38854 YIL024CYIL024C 570 nt2.94□□□□□ -1.94
TDA11P38854 LAC1YKL008C 1257 nt2.94□□□□□ -1.94
TDA11P38854 RUF20RUF20 443 nt2.94□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 20.5 ms