Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV3P03979 FAM99A-202ENST00000538190 1989 ntBASIC16.71■□□□□ 0.27
TRGV3P03979 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV3P03979 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV3P03979 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV3P03979 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.71■□□□□ 0.27
TRGV3P03979 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV3P03979 C11orf96-202ENST00000528572 1834 ntBASIC16.71■□□□□ 0.27
TRGV3P03979 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TRGV3P03979 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV3P03979 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV3P03979 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.71■□□□□ 0.27
TRGV3P03979 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.71■□□□□ 0.27
TRGV3P03979 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.71■□□□□ 0.27
TRGV3P03979 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRGV3P03979 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
TRGV3P03979 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV3P03979 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV3P03979 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRGV3P03979 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV3P03979 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV3P03979 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.7■□□□□ 0.26
TRGV3P03979 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.7■□□□□ 0.26
TRGV3P03979 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.7■□□□□ 0.26
TRGV3P03979 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV3P03979 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV3P03979 YBX1P1-201ENST00000445822 960 ntBASIC16.7■□□□□ 0.26
TRGV3P03979 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.7■□□□□ 0.26
TRGV3P03979 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV3P03979 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV3P03979 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV3P03979 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV3P03979 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV3P03979 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV3P03979 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV3P03979 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV3P03979 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV3P03979 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV3P03979 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV3P03979 AC005224.4-201ENST00000583262 1652 ntBASIC16.69■□□□□ 0.26
TRGV3P03979 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRGV3P03979 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV3P03979 LINC02228-203ENST00000641970 1355 ntBASIC16.69■□□□□ 0.26
TRGV3P03979 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV3P03979 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV3P03979 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRGV3P03979 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV3P03979 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV3P03979 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.69■□□□□ 0.26
TRGV3P03979 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV3P03979 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRGV3P03979 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV3P03979 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV3P03979 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV3P03979 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.69■□□□□ 0.26
TRGV3P03979 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV3P03979 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV3P03979 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.68■□□□□ 0.26
TRGV3P03979 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV3P03979 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV3P03979 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.68■□□□□ 0.26
TRGV3P03979 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV3P03979 AC123595.1-201ENST00000440769 1046 ntBASIC16.68■□□□□ 0.26
TRGV3P03979 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.68■□□□□ 0.26
TRGV3P03979 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.68■□□□□ 0.26
TRGV3P03979 AP006587.3-201ENST00000525742 1516 ntBASIC16.68■□□□□ 0.26
TRGV3P03979 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
TRGV3P03979 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.68■□□□□ 0.26
TRGV3P03979 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
TRGV3P03979 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TRGV3P03979 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRGV3P03979 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.68■□□□□ 0.26
TRGV3P03979 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.68■□□□□ 0.26
TRGV3P03979 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.68■□□□□ 0.26
TRGV3P03979 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV3P03979 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV3P03979 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV3P03979 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV3P03979 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRGV3P03979 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRGV3P03979 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV3P03979 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRGV3P03979 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV3P03979 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV3P03979 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV3P03979 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.67■□□□□ 0.26
TRGV3P03979 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.67■□□□□ 0.26
TRGV3P03979 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.67■□□□□ 0.26
TRGV3P03979 TPRG1LP1-201ENST00000598702 760 ntBASIC16.67■□□□□ 0.26
TRGV3P03979 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV3P03979 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV3P03979 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TRGV3P03979 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV3P03979 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV3P03979 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV3P03979 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV3P03979 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV3P03979 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV3P03979 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV3P03979 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms