Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
MT-ND3P03897 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
MT-ND3P03897 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MT-ND3P03897 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.58■■□□□ 1.05
MT-ND3P03897 AC241377.3-202ENST00000626088 1088 ntBASIC21.58■■□□□ 1.05
MT-ND3P03897 AC241585.3-202ENST00000628937 1088 ntBASIC21.58■■□□□ 1.05
MT-ND3P03897 AC245100.8-202ENST00000629247 1058 ntBASIC21.58■■□□□ 1.05
MT-ND3P03897 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MT-ND3P03897 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
MT-ND3P03897 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.58■■□□□ 1.04
MT-ND3P03897 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MT-ND3P03897 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MT-ND3P03897 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
MT-ND3P03897 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
MT-ND3P03897 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
MT-ND3P03897 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MT-ND3P03897 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MT-ND3P03897 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
MT-ND3P03897 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
MT-ND3P03897 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.57■■□□□ 1.04
MT-ND3P03897 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
MT-ND3P03897 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MT-ND3P03897 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-ND3P03897 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MT-ND3P03897 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-ND3P03897 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-ND3P03897 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
MT-ND3P03897 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-ND3P03897 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.57■■□□□ 1.04
MT-ND3P03897 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.56■■□□□ 1.04
MT-ND3P03897 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
MT-ND3P03897 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MT-ND3P03897 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MT-ND3P03897 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MT-ND3P03897 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
MT-ND3P03897 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MT-ND3P03897 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
MT-ND3P03897 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MT-ND3P03897 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.56■■□□□ 1.04
MT-ND3P03897 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MT-ND3P03897 ZNRF2P3-201ENST00000424200 374 ntBASIC21.56■■□□□ 1.04
MT-ND3P03897 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MT-ND3P03897 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MT-ND3P03897 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.56■■□□□ 1.04
MT-ND3P03897 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
MT-ND3P03897 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.56■■□□□ 1.04
MT-ND3P03897 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.56■■□□□ 1.04
MT-ND3P03897 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
MT-ND3P03897 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MT-ND3P03897 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.56■■□□□ 1.04
MT-ND3P03897 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MT-ND3P03897 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MT-ND3P03897 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.56■■□□□ 1.04
MT-ND3P03897 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND3P03897 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
MT-ND3P03897 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND3P03897 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND3P03897 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND3P03897 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND3P03897 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.55■■□□□ 1.04
MT-ND3P03897 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND3P03897 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
MT-ND3P03897 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND3P03897 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
MT-ND3P03897 AC099791.2-201ENST00000605725 427 ntBASIC21.55■■□□□ 1.04
MT-ND3P03897 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
MT-ND3P03897 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
MT-ND3P03897 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND3P03897 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
MT-ND3P03897 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND3P03897 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND3P03897 AC073130.3-201ENST00000624389 2278 ntBASIC21.55■■□□□ 1.04
MT-ND3P03897 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND3P03897 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND3P03897 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND3P03897 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND3P03897 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.55■■□□□ 1.04
MT-ND3P03897 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND3P03897 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MT-ND3P03897 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
MT-ND3P03897 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MT-ND3P03897 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.54■■□□□ 1.04
MT-ND3P03897 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MT-ND3P03897 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MT-ND3P03897 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.54■■□□□ 1.04
MT-ND3P03897 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MT-ND3P03897 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
MT-ND3P03897 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
MT-ND3P03897 AC079089.2-201ENST00000531211 1277 ntBASIC21.54■■□□□ 1.04
MT-ND3P03897 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.54■■□□□ 1.04
MT-ND3P03897 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
MT-ND3P03897 AC011298.3-201ENST00000615796 283 ntBASIC21.54■■□□□ 1.04
MT-ND3P03897 AL136967.2-201ENST00000623968 743 ntBASIC21.54■■□□□ 1.04
MT-ND3P03897 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.54■■□□□ 1.04
MT-ND3P03897 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MT-ND3P03897 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
MT-ND3P03897 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
MT-ND3P03897 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MT-ND3P03897 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MT-ND3P03897 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms