Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.74■■□□□ 1.39
LGR5O75473 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
LGR5O75473 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.74■■□□□ 1.39
LGR5O75473 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.74■■□□□ 1.39
LGR5O75473 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.74■■□□□ 1.39
LGR5O75473 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LGR5O75473 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
LGR5O75473 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LGR5O75473 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
LGR5O75473 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.73■■□□□ 1.39
LGR5O75473 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
LGR5O75473 AC092053.2-201ENST00000640557 1818 ntBASIC23.73■■□□□ 1.39
LGR5O75473 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LGR5O75473 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LGR5O75473 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.73■■□□□ 1.39
LGR5O75473 AC142086.2-201ENST00000569753 217 ntBASIC23.73■■□□□ 1.39
LGR5O75473 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.73■■□□□ 1.39
LGR5O75473 AL121832.2-201ENST00000610979 668 ntBASIC23.73■■□□□ 1.39
LGR5O75473 AL050303.2-201ENST00000619798 666 ntBASIC23.73■■□□□ 1.39
LGR5O75473 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
LGR5O75473 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.73■■□□□ 1.39
LGR5O75473 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.73■■□□□ 1.39
LGR5O75473 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
LGR5O75473 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LGR5O75473 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LGR5O75473 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.73■■□□□ 1.39
LGR5O75473 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LGR5O75473 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.72■■□□□ 1.39
LGR5O75473 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.72■■□□□ 1.39
LGR5O75473 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LGR5O75473 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
LGR5O75473 CNN2P6-201ENST00000439038 900 ntBASIC23.72■■□□□ 1.39
LGR5O75473 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.72■■□□□ 1.39
LGR5O75473 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.72■■□□□ 1.39
LGR5O75473 AC010536.3-201ENST00000620306 533 ntBASIC23.72■■□□□ 1.39
LGR5O75473 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.72■■□□□ 1.39
LGR5O75473 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.72■■□□□ 1.39
LGR5O75473 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.72■■□□□ 1.39
LGR5O75473 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LGR5O75473 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LGR5O75473 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.72■■□□□ 1.39
LGR5O75473 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.72■■□□□ 1.39
LGR5O75473 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LGR5O75473 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
LGR5O75473 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LGR5O75473 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
LGR5O75473 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
LGR5O75473 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.71■■□□□ 1.39
LGR5O75473 AC007322.1-201ENST00000426983 750 ntBASIC23.71■■□□□ 1.39
LGR5O75473 AC083906.2-201ENST00000511578 360 ntBASIC23.71■■□□□ 1.39
LGR5O75473 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.71■■□□□ 1.39
LGR5O75473 SLC7A5P2-201ENST00000553010 536 ntBASIC23.71■■□□□ 1.39
LGR5O75473 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.71■■□□□ 1.39
LGR5O75473 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
LGR5O75473 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.71■■□□□ 1.39
LGR5O75473 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LGR5O75473 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LGR5O75473 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
LGR5O75473 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
LGR5O75473 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
LGR5O75473 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
LGR5O75473 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LGR5O75473 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LGR5O75473 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LGR5O75473 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.7■■□□□ 1.38
LGR5O75473 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.7■■□□□ 1.38
LGR5O75473 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.7■■□□□ 1.38
LGR5O75473 CD99P1-205ENST00000527459 561 ntBASIC23.7■■□□□ 1.38
LGR5O75473 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.7■■□□□ 1.38
LGR5O75473 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LGR5O75473 TMEM191A-211ENST00000637163 1067 ntBASIC23.7■■□□□ 1.38
LGR5O75473 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LGR5O75473 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.7■■□□□ 1.38
LGR5O75473 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LGR5O75473 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.69■■□□□ 1.38
LGR5O75473 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
LGR5O75473 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LGR5O75473 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
LGR5O75473 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.69■■□□□ 1.38
LGR5O75473 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
LGR5O75473 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.69■■□□□ 1.38
LGR5O75473 TSPY6P-201ENST00000448518 926 ntBASIC23.69■■□□□ 1.38
LGR5O75473 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.69■■□□□ 1.38
LGR5O75473 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.69■■□□□ 1.38
LGR5O75473 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.69■■□□□ 1.38
LGR5O75473 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
LGR5O75473 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LGR5O75473 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LGR5O75473 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LGR5O75473 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LGR5O75473 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LGR5O75473 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.68■■□□□ 1.38
LGR5O75473 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LGR5O75473 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LGR5O75473 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LGR5O75473 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.68■■□□□ 1.38
LGR5O75473 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.68■■□□□ 1.38
LGR5O75473 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.68■■□□□ 1.38
LGR5O75473 AC003102.1-202ENST00000563394 1796 ntBASIC23.68■■□□□ 1.38
LGR5O75473 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms