Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZIC3O60481 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZIC3O60481 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZIC3O60481 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZIC3O60481 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZIC3O60481 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.22■□□□□ 0.67
ZIC3O60481 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.22■□□□□ 0.67
ZIC3O60481 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.22■□□□□ 0.67
ZIC3O60481 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZIC3O60481 EP400NL-214ENST00000641289 2402 ntBASIC19.22■□□□□ 0.67
ZIC3O60481 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZIC3O60481 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ZIC3O60481 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.22■□□□□ 0.67
ZIC3O60481 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZIC3O60481 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
ZIC3O60481 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZIC3O60481 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.21■□□□□ 0.67
ZIC3O60481 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.21■□□□□ 0.67
ZIC3O60481 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.21■□□□□ 0.67
ZIC3O60481 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.21■□□□□ 0.67
ZIC3O60481 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZIC3O60481 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.21■□□□□ 0.67
ZIC3O60481 AC138907.5-202ENST00000569484 235 ntBASIC19.21■□□□□ 0.67
ZIC3O60481 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.21■□□□□ 0.67
ZIC3O60481 AP001160.3-201ENST00000601484 763 ntBASIC19.21■□□□□ 0.67
ZIC3O60481 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZIC3O60481 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ZIC3O60481 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ZIC3O60481 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZIC3O60481 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.2■□□□□ 0.66
ZIC3O60481 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.2■□□□□ 0.66
ZIC3O60481 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZIC3O60481 C11orf96-202ENST00000528572 1834 ntBASIC19.2■□□□□ 0.66
ZIC3O60481 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZIC3O60481 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZIC3O60481 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZIC3O60481 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZIC3O60481 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZIC3O60481 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.2■□□□□ 0.66
ZIC3O60481 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.19■□□□□ 0.66
ZIC3O60481 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZIC3O60481 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ZIC3O60481 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZIC3O60481 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZIC3O60481 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.19■□□□□ 0.66
ZIC3O60481 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
ZIC3O60481 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.19■□□□□ 0.66
ZIC3O60481 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZIC3O60481 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ZIC3O60481 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.19■□□□□ 0.66
ZIC3O60481 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZIC3O60481 AC006015.1-201ENST00000429970 570 ntBASIC19.19■□□□□ 0.66
ZIC3O60481 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.19■□□□□ 0.66
ZIC3O60481 AC137761.2-201ENST00000561729 223 ntBASIC19.19■□□□□ 0.66
ZIC3O60481 AC145350.3-201ENST00000569033 163 ntBASIC19.19■□□□□ 0.66
ZIC3O60481 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.19■□□□□ 0.66
ZIC3O60481 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZIC3O60481 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
ZIC3O60481 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.18■□□□□ 0.66
ZIC3O60481 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZIC3O60481 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.18■□□□□ 0.66
ZIC3O60481 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZIC3O60481 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.18■□□□□ 0.66
ZIC3O60481 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZIC3O60481 AL137784.2-201ENST00000607332 1000 ntBASIC19.18■□□□□ 0.66
ZIC3O60481 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZIC3O60481 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZIC3O60481 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ZIC3O60481 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZIC3O60481 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZIC3O60481 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.18■□□□□ 0.66
ZIC3O60481 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZIC3O60481 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZIC3O60481 AC010141.2-201ENST00000452426 721 ntBASIC19.17■□□□□ 0.66
ZIC3O60481 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.17■□□□□ 0.66
ZIC3O60481 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZIC3O60481 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.17■□□□□ 0.66
ZIC3O60481 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.17■□□□□ 0.66
ZIC3O60481 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZIC3O60481 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ZIC3O60481 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC3O60481 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.16■□□□□ 0.66
ZIC3O60481 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC3O60481 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC3O60481 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC3O60481 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.16■□□□□ 0.66
ZIC3O60481 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.16■□□□□ 0.66
ZIC3O60481 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC3O60481 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC3O60481 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.16■□□□□ 0.66
ZIC3O60481 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.16■□□□□ 0.66
ZIC3O60481 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.16■□□□□ 0.66
ZIC3O60481 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.16■□□□□ 0.66
ZIC3O60481 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.16■□□□□ 0.66
ZIC3O60481 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC3O60481 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC3O60481 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.16■□□□□ 0.66
ZIC3O60481 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC3O60481 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC3O60481 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms