Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.58■□□□□ 0.72
ARHGEF9O43307 AP001330.3-201ENST00000520123 633 ntBASIC19.58■□□□□ 0.72
ARHGEF9O43307 AL499627.2-201ENST00000606283 725 ntBASIC19.58■□□□□ 0.72
ARHGEF9O43307 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ARHGEF9O43307 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ARHGEF9O43307 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ARHGEF9O43307 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ARHGEF9O43307 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
ARHGEF9O43307 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
ARHGEF9O43307 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ARHGEF9O43307 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.58■□□□□ 0.72
ARHGEF9O43307 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ARHGEF9O43307 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ARHGEF9O43307 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ARHGEF9O43307 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ARHGEF9O43307 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.57■□□□□ 0.72
ARHGEF9O43307 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ARHGEF9O43307 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ARHGEF9O43307 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ARHGEF9O43307 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.57■□□□□ 0.72
ARHGEF9O43307 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.57■□□□□ 0.72
ARHGEF9O43307 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.57■□□□□ 0.72
ARHGEF9O43307 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ARHGEF9O43307 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ARHGEF9O43307 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.57■□□□□ 0.72
ARHGEF9O43307 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ARHGEF9O43307 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ARHGEF9O43307 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ARHGEF9O43307 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.57■□□□□ 0.72
ARHGEF9O43307 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ARHGEF9O43307 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
ARHGEF9O43307 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARHGEF9O43307 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.56■□□□□ 0.72
ARHGEF9O43307 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.56■□□□□ 0.72
ARHGEF9O43307 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARHGEF9O43307 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ARHGEF9O43307 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.56■□□□□ 0.72
ARHGEF9O43307 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
ARHGEF9O43307 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARHGEF9O43307 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARHGEF9O43307 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.56■□□□□ 0.72
ARHGEF9O43307 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ARHGEF9O43307 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARHGEF9O43307 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ARHGEF9O43307 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.56■□□□□ 0.72
ARHGEF9O43307 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ARHGEF9O43307 RASA4CP-201ENST00000424092 1398 ntBASIC19.56■□□□□ 0.72
ARHGEF9O43307 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.56■□□□□ 0.72
ARHGEF9O43307 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ARHGEF9O43307 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARHGEF9O43307 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARHGEF9O43307 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.56■□□□□ 0.72
ARHGEF9O43307 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARHGEF9O43307 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARHGEF9O43307 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARHGEF9O43307 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
ARHGEF9O43307 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARHGEF9O43307 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.55■□□□□ 0.72
ARHGEF9O43307 AC099791.2-201ENST00000605725 427 ntBASIC19.55■□□□□ 0.72
ARHGEF9O43307 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ARHGEF9O43307 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARHGEF9O43307 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARHGEF9O43307 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARHGEF9O43307 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ARHGEF9O43307 C11orf96-202ENST00000528572 1834 ntBASIC19.55■□□□□ 0.72
ARHGEF9O43307 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARHGEF9O43307 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARHGEF9O43307 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARHGEF9O43307 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARHGEF9O43307 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ARHGEF9O43307 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARHGEF9O43307 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARHGEF9O43307 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
ARHGEF9O43307 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARHGEF9O43307 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.54■□□□□ 0.72
ARHGEF9O43307 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARHGEF9O43307 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.54■□□□□ 0.72
ARHGEF9O43307 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARHGEF9O43307 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.54■□□□□ 0.72
ARHGEF9O43307 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARHGEF9O43307 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ARHGEF9O43307 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.54■□□□□ 0.72
ARHGEF9O43307 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARHGEF9O43307 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.54■□□□□ 0.72
ARHGEF9O43307 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.54■□□□□ 0.72
ARHGEF9O43307 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF9O43307 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ARHGEF9O43307 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ARHGEF9O43307 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.53■□□□□ 0.72
ARHGEF9O43307 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.53■□□□□ 0.72
ARHGEF9O43307 AC006455.2-201ENST00000429931 906 ntBASIC19.53■□□□□ 0.72
ARHGEF9O43307 AL162430.1-201ENST00000480705 870 ntBASIC19.53■□□□□ 0.72
ARHGEF9O43307 AC027682.1-201ENST00000562846 899 ntBASIC19.53■□□□□ 0.72
ARHGEF9O43307 pRNA.6-201ENST00000610482 90 ntBASIC19.53■□□□□ 0.72
ARHGEF9O43307 CA15P2-201ENST00000611168 834 ntBASIC19.53■□□□□ 0.72
ARHGEF9O43307 pRNA.5-201ENST00000612139 90 ntBASIC19.53■□□□□ 0.72
ARHGEF9O43307 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF9O43307 pRNA.11-201ENST00000618423 90 ntBASIC19.53■□□□□ 0.72
ARHGEF9O43307 pRNA.13-201ENST00000619112 90 ntBASIC19.53■□□□□ 0.72
ARHGEF9O43307 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms