Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CHL1O00533 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
CHL1O00533 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.55■■■□□ 2
CHL1O00533 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC27.55■■■□□ 2
CHL1O00533 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
CHL1O00533 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
CHL1O00533 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC27.55■■■□□ 2
CHL1O00533 SPI1-203ENST00000533030 661 ntTSL 2 BASIC27.55■■■□□ 2
CHL1O00533 GAS2L1P2-201ENST00000436355 1356 ntBASIC27.55■■■□□ 2
CHL1O00533 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
CHL1O00533 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC27.55■■■□□ 2
CHL1O00533 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CHL1O00533 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CHL1O00533 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
CHL1O00533 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC27.54■■■□□ 2
CHL1O00533 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC27.54■■■□□ 2
CHL1O00533 RAP2CP1-201ENST00000605103 478 ntBASIC27.54■■■□□ 2
CHL1O00533 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC27.54■■■□□ 2
CHL1O00533 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHL1O00533 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC27.53■■■□□ 2
CHL1O00533 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHL1O00533 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC27.53■■■□□ 2
CHL1O00533 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC27.53■■■□□ 2
CHL1O00533 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC27.53■■■□□ 2
CHL1O00533 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC27.53■■■□□ 2
CHL1O00533 UBE2DNL-204ENST00000602536 740 ntBASIC27.53■■■□□ 2
CHL1O00533 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
CHL1O00533 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHL1O00533 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CHL1O00533 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC27.52■■■□□ 2
CHL1O00533 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CHL1O00533 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CHL1O00533 NAA20-201ENST00000310450 920 ntTSL 2 BASIC27.52■■■□□ 2
CHL1O00533 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CHL1O00533 KRT18P11-201ENST00000435214 1283 ntBASIC27.52■■■□□ 2
CHL1O00533 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC27.52■■■□□ 2
CHL1O00533 AC080038.1-201ENST00000611274 1154 ntBASIC27.52■■■□□ 2
CHL1O00533 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC27.52■■■□□ 2
CHL1O00533 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC27.52■■■□□ 2
CHL1O00533 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC27.52■■■□□ 2
CHL1O00533 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CHL1O00533 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC27.51■■■□□ 2
CHL1O00533 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CHL1O00533 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CHL1O00533 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CHL1O00533 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC27.51■■□□□ 1.99
CHL1O00533 KRT18P20-201ENST00000548986 1279 ntBASIC27.51■■□□□ 1.99
CHL1O00533 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC27.51■■□□□ 1.99
CHL1O00533 MFSD11-216ENST00000590393 1141 ntBASIC27.51■■□□□ 1.99
CHL1O00533 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CHL1O00533 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CHL1O00533 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
CHL1O00533 CDCA4P2-201ENST00000441182 718 ntBASIC27.5■■□□□ 1.99
CHL1O00533 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CHL1O00533 AC090192.1-201ENST00000517740 490 ntBASIC27.5■■□□□ 1.99
CHL1O00533 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CHL1O00533 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CHL1O00533 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CHL1O00533 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CHL1O00533 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
CHL1O00533 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CHL1O00533 AL117328.2-201ENST00000624617 1940 ntBASIC27.49■■□□□ 1.99
CHL1O00533 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC27.49■■□□□ 1.99
CHL1O00533 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC27.49■■□□□ 1.99
CHL1O00533 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
CHL1O00533 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC27.49■■□□□ 1.99
CHL1O00533 AC011767.1-201ENST00000617410 1153 ntBASIC27.49■■□□□ 1.99
CHL1O00533 BID-214ENST00000617586 542 ntTSL 5 BASIC27.49■■□□□ 1.99
CHL1O00533 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC27.49■■□□□ 1.99
CHL1O00533 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
CHL1O00533 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC27.49■■□□□ 1.99
CHL1O00533 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CHL1O00533 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CHL1O00533 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC27.49■■□□□ 1.99
CHL1O00533 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CHL1O00533 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
CHL1O00533 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CHL1O00533 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CHL1O00533 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
CHL1O00533 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CHL1O00533 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC27.48■■□□□ 1.99
CHL1O00533 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CHL1O00533 AC073111.5-205ENST00000641717 521 ntBASIC27.48■■□□□ 1.99
CHL1O00533 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CHL1O00533 RARG-204ENST00000543726 1779 ntTSL 2 BASIC27.48■■□□□ 1.99
CHL1O00533 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC27.47■■□□□ 1.99
CHL1O00533 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CHL1O00533 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC27.47■■□□□ 1.99
CHL1O00533 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
CHL1O00533 SLC7A5P2-201ENST00000553010 536 ntBASIC27.47■■□□□ 1.99
CHL1O00533 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHL1O00533 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC27.47■■□□□ 1.99
CHL1O00533 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHL1O00533 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC27.47■■□□□ 1.99
CHL1O00533 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC27.47■■□□□ 1.99
CHL1O00533 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CHL1O00533 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC27.46■■□□□ 1.99
CHL1O00533 PARP1-202ENST00000366792 553 ntTSL 3 BASIC27.46■■□□□ 1.99
CHL1O00533 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CHL1O00533 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC27.46■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms