Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV2A0A0B4J234 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV2A0A0B4J234 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV2A0A0B4J234 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV2A0A0B4J234 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV2A0A0B4J234 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRAV2A0A0B4J234 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV2A0A0B4J234 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV2A0A0B4J234 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV2A0A0B4J234 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
TRAV2A0A0B4J234 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV2A0A0B4J234 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV2A0A0B4J234 AC027612.3-201ENST00000413684 1047 ntBASIC16.06■□□□□ 0.16
TRAV2A0A0B4J234 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV2A0A0B4J234 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV2A0A0B4J234 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV2A0A0B4J234 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV2A0A0B4J234 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV2A0A0B4J234 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV2A0A0B4J234 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV2A0A0B4J234 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV2A0A0B4J234 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV2A0A0B4J234 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV2A0A0B4J234 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV2A0A0B4J234 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV2A0A0B4J234 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV2A0A0B4J234 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV2A0A0B4J234 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV2A0A0B4J234 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV2A0A0B4J234 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV2A0A0B4J234 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV2A0A0B4J234 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV2A0A0B4J234 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV2A0A0B4J234 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV2A0A0B4J234 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV2A0A0B4J234 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV2A0A0B4J234 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV2A0A0B4J234 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAV2A0A0B4J234 AP006587.3-201ENST00000525742 1516 ntBASIC16.04■□□□□ 0.16
TRAV2A0A0B4J234 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.04■□□□□ 0.16
TRAV2A0A0B4J234 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV2A0A0B4J234 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAV2A0A0B4J234 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV2A0A0B4J234 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV2A0A0B4J234 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.04■□□□□ 0.16
TRAV2A0A0B4J234 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV2A0A0B4J234 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV2A0A0B4J234 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV2A0A0B4J234 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV2A0A0B4J234 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV2A0A0B4J234 FAM99A-202ENST00000538190 1989 ntBASIC16.04■□□□□ 0.16
TRAV2A0A0B4J234 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV2A0A0B4J234 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV2A0A0B4J234 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV2A0A0B4J234 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRAV2A0A0B4J234 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV2A0A0B4J234 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV2A0A0B4J234 AC005224.4-201ENST00000583262 1652 ntBASIC16.03■□□□□ 0.16
TRAV2A0A0B4J234 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV2A0A0B4J234 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRAV2A0A0B4J234 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.03■□□□□ 0.16
TRAV2A0A0B4J234 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.03■□□□□ 0.16
TRAV2A0A0B4J234 AC104564.3-201ENST00000582367 638 ntBASIC16.03■□□□□ 0.16
TRAV2A0A0B4J234 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV2A0A0B4J234 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV2A0A0B4J234 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV2A0A0B4J234 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV2A0A0B4J234 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV2A0A0B4J234 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAV2A0A0B4J234 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV2A0A0B4J234 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAV2A0A0B4J234 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV2A0A0B4J234 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV2A0A0B4J234 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV2A0A0B4J234 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV2A0A0B4J234 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV2A0A0B4J234 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV2A0A0B4J234 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV2A0A0B4J234 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
TRAV2A0A0B4J234 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV2A0A0B4J234 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV2A0A0B4J234 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV2A0A0B4J234 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV2A0A0B4J234 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV2A0A0B4J234 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV2A0A0B4J234 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV2A0A0B4J234 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV2A0A0B4J234 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.01■□□□□ 0.15
TRAV2A0A0B4J234 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV2A0A0B4J234 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV2A0A0B4J234 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV2A0A0B4J234 AC123595.1-201ENST00000440769 1046 ntBASIC16.01■□□□□ 0.15
TRAV2A0A0B4J234 TPRG1LP1-201ENST00000598702 760 ntBASIC16.01■□□□□ 0.15
TRAV2A0A0B4J234 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV2A0A0B4J234 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV2A0A0B4J234 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV2A0A0B4J234 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV2A0A0B4J234 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV2A0A0B4J234 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16■□□□□ 0.15
TRAV2A0A0B4J234 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms