Protein–RNA interactions for Protein: O15068

MCF2L, Guanine nucleotide exchange factor DBS, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2LO15068 TGM5-206ENST00000611276 2510 ntTSL 5 BASIC12.1□□□□□ -0.47
MCF2LO15068 YIPF1-202ENST00000371399 1503 ntTSL 2 BASIC12.1□□□□□ -0.47
MCF2LO15068 MAPK9-205ENST00000397072 1416 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
MCF2LO15068 AC022748.2-203ENST00000564933 1432 ntBASIC12.1□□□□□ -0.47
MCF2LO15068 PMEPA1-201ENST00000265626 4627 ntTSL 3 BASIC12.1□□□□□ -0.47
MCF2LO15068 SHROOM2-202ENST00000418909 4615 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
MCF2LO15068 RNASE4-202ENST00000555597 1341 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
MCF2LO15068 SSRP1-201ENST00000278412 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
MCF2LO15068 LINC00969-213ENST00000445707 2363 ntTSL 2 BASIC12.1□□□□□ -0.47
MCF2LO15068 DDX27-201ENST00000371764 2643 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
MCF2LO15068 NPAP1P3-201ENST00000432327 1586 ntBASIC12.09□□□□□ -0.47
MCF2LO15068 MIR99AHG-220ENST00000635845 1588 ntTSL 5 BASIC12.09□□□□□ -0.47
MCF2LO15068 TUBGCP5-205ENST00000615383 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MCF2LO15068 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
MCF2LO15068 AC004801.4-201ENST00000546738 3112 ntTSL 2 BASIC12.09□□□□□ -0.47
MCF2LO15068 BTNL3-201ENST00000342868 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MCF2LO15068 AC106788.1-201ENST00000550753 2661 ntTSL 2 BASIC12.09□□□□□ -0.47
MCF2LO15068 LINC02288-201ENST00000500215 2924 ntTSL 2 BASIC12.09□□□□□ -0.47
MCF2LO15068 ZNF859P-201ENST00000502859 1966 ntBASIC12.09□□□□□ -0.47
MCF2LO15068 PCAT1-202ENST00000561978 1992 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MCF2LO15068 WDR59-223ENST00000616369 1953 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MCF2LO15068 FHIT-204ENST00000468189 1634 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
MCF2LO15068 CICP3-201ENST00000440782 2455 ntBASIC12.09□□□□□ -0.47
MCF2LO15068 DERL1-201ENST00000259512 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MCF2LO15068 DRGX-201ENST00000374139 2738 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
MCF2LO15068 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MCF2LO15068 JPT2-202ENST00000382710 962 ntTSL 2 BASIC12.09□□□□□ -0.47
MCF2LO15068 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
MCF2LO15068 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC12.09□□□□□ -0.47
MCF2LO15068 FRG2B-201ENST00000425520 890 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
MCF2LO15068 HNRNPA1P59-201ENST00000430583 918 ntBASIC12.09□□□□□ -0.47
MCF2LO15068 BX842568.1-201ENST00000435382 551 ntBASIC12.09□□□□□ -0.47
MCF2LO15068 AL627082.1-201ENST00000443847 235 ntBASIC12.09□□□□□ -0.47
MCF2LO15068 RN7SL513P-201ENST00000465715 298 ntBASIC12.09□□□□□ -0.47
MCF2LO15068 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC12.09□□□□□ -0.47
MCF2LO15068 AC034229.1-201ENST00000506299 943 ntTSL 2 BASIC12.09□□□□□ -0.47
MCF2LO15068 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC12.09□□□□□ -0.47
MCF2LO15068 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
MCF2LO15068 KBTBD11-OT1-201ENST00000518539 815 ntTSL 3 BASIC12.09□□□□□ -0.47
MCF2LO15068 AC091163.2-201ENST00000519032 460 ntTSL 5 BASIC12.09□□□□□ -0.47
MCF2LO15068 CETN3-203ENST00000522083 1026 ntTSL 2 BASIC12.09□□□□□ -0.47
MCF2LO15068 CETN3-204ENST00000522565 867 ntTSL 2 BASIC12.09□□□□□ -0.47
MCF2LO15068 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC12.09□□□□□ -0.47
MCF2LO15068 AC015712.1-204ENST00000558254 755 ntTSL 3 BASIC12.09□□□□□ -0.47
MCF2LO15068 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC12.09□□□□□ -0.47
MCF2LO15068 MIR4294-201ENST00000584548 76 ntBASIC12.09□□□□□ -0.47
MCF2LO15068 AC104365.2-201ENST00000586383 740 ntTSL 3 BASIC12.09□□□□□ -0.47
MCF2LO15068 PDLIM1P1-201ENST00000604187 969 ntBASIC12.09□□□□□ -0.47
MCF2LO15068 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC12.09□□□□□ -0.47
MCF2LO15068 KRTAP4-9-202ENST00000617453 558 ntTSL 5 BASIC12.09□□□□□ -0.47
MCF2LO15068 RHOXF1P3-202ENST00000639347 851 ntTSL 5 BASIC12.09□□□□□ -0.47
MCF2LO15068 TMEM8B-201ENST00000377988 3731 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MCF2LO15068 ADAMTS7P3-201ENST00000566116 3716 ntBASIC12.09□□□□□ -0.47
MCF2LO15068 CLEC4F-202ENST00000426626 2012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
MCF2LO15068 L1CAM-201ENST00000361699 3888 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MCF2LO15068 HECTD3-201ENST00000372168 2530 ntTSL 2 BASIC12.09□□□□□ -0.47
MCF2LO15068 NUMA1-202ENST00000358965 7227 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
MCF2LO15068 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MCF2LO15068 YEATS4-201ENST00000247843 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MCF2LO15068 SIRT1-204ENST00000432464 3587 ntTSL 5 BASIC12.09□□□□□ -0.47
MCF2LO15068 KBTBD4-209ENST00000533290 3079 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MCF2LO15068 ACTG2-202ENST00000409624 2064 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
MCF2LO15068 GBA-204ENST00000428024 1817 ntTSL 2 BASIC12.09□□□□□ -0.47
MCF2LO15068 AC124944.3-201ENST00000607976 1304 ntBASIC12.09□□□□□ -0.47
MCF2LO15068 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MCF2LO15068 RPS15A-201ENST00000322989 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MCF2LO15068 AC009779.3-202ENST00000550412 3382 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
MCF2LO15068 FN1-207ENST00000421182 8103 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
MCF2LO15068 EIF3I-202ENST00000373586 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
MCF2LO15068 AC011479.3-201ENST00000594299 1890 ntBASIC12.08□□□□□ -0.48
MCF2LO15068 AGPAT4-IT1-201ENST00000624499 1878 ntBASIC12.08□□□□□ -0.48
MCF2LO15068 UHRF1-207ENST00000624301 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
MCF2LO15068 CHTF8-201ENST00000306585 2561 ntBASIC12.08□□□□□ -0.48
MCF2LO15068 SMTNL1-201ENST00000399154 1536 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
MCF2LO15068 NLRP1-201ENST00000262467 5131 ntTSL 5 BASIC12.08□□□□□ -0.48
MCF2LO15068 WFS1-202ENST00000503569 3255 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
MCF2LO15068 SPATA22-201ENST00000268981 1280 ntTSL 2 BASIC12.08□□□□□ -0.48
MCF2LO15068 LYPD4-201ENST00000343055 1051 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
MCF2LO15068 PRDX1-203ENST00000372079 609 ntTSL 3 BASIC12.08□□□□□ -0.48
MCF2LO15068 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC12.08□□□□□ -0.48
MCF2LO15068 AC005730.1-201ENST00000434406 344 ntBASIC12.08□□□□□ -0.48
MCF2LO15068 OR7E23P-201ENST00000435600 1048 ntBASIC12.08□□□□□ -0.48
MCF2LO15068 AL590440.1-201ENST00000436960 428 ntTSL 2 BASIC12.08□□□□□ -0.48
MCF2LO15068 AL355309.1-201ENST00000442158 78 ntBASIC12.08□□□□□ -0.48
MCF2LO15068 AC053503.3-201ENST00000448375 114 ntBASIC12.08□□□□□ -0.48
MCF2LO15068 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
MCF2LO15068 PTS-204ENST00000525803 625 ntTSL 3 BASIC12.08□□□□□ -0.48
MCF2LO15068 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC12.08□□□□□ -0.48
MCF2LO15068 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC12.08□□□□□ -0.48
MCF2LO15068 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC12.08□□□□□ -0.48
MCF2LO15068 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC12.08□□□□□ -0.48
MCF2LO15068 SDHDP1-201ENST00000588055 474 ntBASIC12.08□□□□□ -0.48
MCF2LO15068 H3F3B-212ENST00000592643 795 ntTSL 3 BASIC12.08□□□□□ -0.48
MCF2LO15068 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
MCF2LO15068 LYPD4-202ENST00000601246 1076 ntTSL 5 BASIC12.08□□□□□ -0.48
MCF2LO15068 AC008735.4-201ENST00000614815 608 ntBASIC12.08□□□□□ -0.48
MCF2LO15068 AC130343.2-201ENST00000615078 426 ntBASIC12.08□□□□□ -0.48
MCF2LO15068 CU634019.5-201ENST00000623518 924 ntBASIC12.08□□□□□ -0.48
MCF2LO15068 AP003062.2-201ENST00000624288 1117 ntBASIC12.08□□□□□ -0.48
MCF2LO15068 PLSCR4-202ENST00000383083 3033 ntTSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 221.5 ms