Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB1Q9Y5F3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB1Q9Y5F3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB1Q9Y5F3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHB1Q9Y5F3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PCDHB1Q9Y5F3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.35■■□□□ 1.01
PCDHB1Q9Y5F3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHB1Q9Y5F3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.35■■□□□ 1.01
PCDHB1Q9Y5F3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHB1Q9Y5F3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHB1Q9Y5F3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB1Q9Y5F3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB1Q9Y5F3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB1Q9Y5F3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB1Q9Y5F3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB1Q9Y5F3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.35■■□□□ 1.01
PCDHB1Q9Y5F3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB1Q9Y5F3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB1Q9Y5F3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB1Q9Y5F3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB1Q9Y5F3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB1Q9Y5F3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB1Q9Y5F3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB1Q9Y5F3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHB1Q9Y5F3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB1Q9Y5F3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB1Q9Y5F3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.34■■□□□ 1.01
PCDHB1Q9Y5F3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB1Q9Y5F3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHB1Q9Y5F3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB1Q9Y5F3 AL034346.1-201ENST00000568244 1277 ntBASIC21.34■■□□□ 1.01
PCDHB1Q9Y5F3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHB1Q9Y5F3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB1Q9Y5F3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB1Q9Y5F3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHB1Q9Y5F3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB1Q9Y5F3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHB1Q9Y5F3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB1Q9Y5F3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB1Q9Y5F3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB1Q9Y5F3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHB1Q9Y5F3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHB1Q9Y5F3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB1Q9Y5F3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHB1Q9Y5F3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.32■■□□□ 1
PCDHB1Q9Y5F3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHB1Q9Y5F3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB1Q9Y5F3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.32■■□□□ 1
PCDHB1Q9Y5F3 FAM99A-202ENST00000538190 1989 ntBASIC21.32■■□□□ 1
PCDHB1Q9Y5F3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.32■■□□□ 1
PCDHB1Q9Y5F3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB1Q9Y5F3 KRT18P61-201ENST00000585825 1298 ntBASIC21.32■■□□□ 1
PCDHB1Q9Y5F3 AC080038.1-201ENST00000611274 1154 ntBASIC21.32■■□□□ 1
PCDHB1Q9Y5F3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHB1Q9Y5F3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PCDHB1Q9Y5F3 AC105233.4-201ENST00000642045 216 ntBASIC21.32■■□□□ 1
PCDHB1Q9Y5F3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB1Q9Y5F3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHB1Q9Y5F3 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.32■■□□□ 1
PCDHB1Q9Y5F3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB1Q9Y5F3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB1Q9Y5F3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
PCDHB1Q9Y5F3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB1Q9Y5F3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
PCDHB1Q9Y5F3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.31■■□□□ 1
PCDHB1Q9Y5F3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB1Q9Y5F3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.31■■□□□ 1
PCDHB1Q9Y5F3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
PCDHB1Q9Y5F3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.31■■□□□ 1
PCDHB1Q9Y5F3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.31■■□□□ 1
PCDHB1Q9Y5F3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
PCDHB1Q9Y5F3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.31■■□□□ 1
PCDHB1Q9Y5F3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHB1Q9Y5F3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PCDHB1Q9Y5F3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB1Q9Y5F3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHB1Q9Y5F3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHB1Q9Y5F3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PCDHB1Q9Y5F3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHB1Q9Y5F3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.3■■□□□ 1
PCDHB1Q9Y5F3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHB1Q9Y5F3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.3■■□□□ 1
PCDHB1Q9Y5F3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.3■■□□□ 1
PCDHB1Q9Y5F3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB1Q9Y5F3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB1Q9Y5F3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB1Q9Y5F3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB1Q9Y5F3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.3■■□□□ 1
PCDHB1Q9Y5F3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB1Q9Y5F3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms