Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 AC019171.1-201ENST00000601251 1056 ntBASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM5Q9Y4Y9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM5Q9Y4Y9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LSM5Q9Y4Y9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM5Q9Y4Y9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LSM5Q9Y4Y9 FEM1AP1-201ENST00000431297 1995 ntBASIC17.52■□□□□ 0.4
LSM5Q9Y4Y9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LSM5Q9Y4Y9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM5Q9Y4Y9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LSM5Q9Y4Y9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LSM5Q9Y4Y9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM5Q9Y4Y9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LSM5Q9Y4Y9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LSM5Q9Y4Y9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
LSM5Q9Y4Y9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LSM5Q9Y4Y9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LSM5Q9Y4Y9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LSM5Q9Y4Y9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.52■□□□□ 0.39
LSM5Q9Y4Y9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM5Q9Y4Y9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LSM5Q9Y4Y9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM5Q9Y4Y9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM5Q9Y4Y9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM5Q9Y4Y9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM5Q9Y4Y9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM5Q9Y4Y9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.51■□□□□ 0.39
LSM5Q9Y4Y9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LSM5Q9Y4Y9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSM5Q9Y4Y9 AC129492.7-201ENST00000622992 756 ntBASIC17.51■□□□□ 0.39
LSM5Q9Y4Y9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM5Q9Y4Y9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM5Q9Y4Y9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM5Q9Y4Y9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.51■□□□□ 0.39
LSM5Q9Y4Y9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM5Q9Y4Y9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM5Q9Y4Y9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM5Q9Y4Y9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 DUX4L4-201ENST00000566884 1269 ntBASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 AC104564.3-201ENST00000582367 638 ntBASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.49■□□□□ 0.39
LSM5Q9Y4Y9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms