Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.27■■□□□ 1
SCN8AQ9UQD0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SCN8AQ9UQD0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.27■■□□□ 1
SCN8AQ9UQD0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.27■■□□□ 1
SCN8AQ9UQD0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.27■■□□□ 1
SCN8AQ9UQD0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.27■■□□□ 1
SCN8AQ9UQD0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.27■□□□□ 0.99
SCN8AQ9UQD0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.27■□□□□ 0.99
SCN8AQ9UQD0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SCN8AQ9UQD0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SCN8AQ9UQD0 AC003102.1-202ENST00000563394 1796 ntBASIC21.26■□□□□ 0.99
SCN8AQ9UQD0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCN8AQ9UQD0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.26■□□□□ 0.99
SCN8AQ9UQD0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SCN8AQ9UQD0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.26■□□□□ 0.99
SCN8AQ9UQD0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
SCN8AQ9UQD0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.26■□□□□ 0.99
SCN8AQ9UQD0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SCN8AQ9UQD0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCN8AQ9UQD0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCN8AQ9UQD0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCN8AQ9UQD0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCN8AQ9UQD0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCN8AQ9UQD0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCN8AQ9UQD0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCN8AQ9UQD0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.25■□□□□ 0.99
SCN8AQ9UQD0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCN8AQ9UQD0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCN8AQ9UQD0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.25■□□□□ 0.99
SCN8AQ9UQD0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.25■□□□□ 0.99
SCN8AQ9UQD0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCN8AQ9UQD0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.25■□□□□ 0.99
SCN8AQ9UQD0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.25■□□□□ 0.99
SCN8AQ9UQD0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
SCN8AQ9UQD0 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.24■□□□□ 0.99
SCN8AQ9UQD0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.24■□□□□ 0.99
SCN8AQ9UQD0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SCN8AQ9UQD0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.24■□□□□ 0.99
SCN8AQ9UQD0 EEF1DP3-203ENST00000566025 782 ntBASIC21.24■□□□□ 0.99
SCN8AQ9UQD0 LINC00565-201ENST00000562710 2331 ntBASIC21.24■□□□□ 0.99
SCN8AQ9UQD0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 AC079834.2-201ENST00000609776 1949 ntBASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 AC004911.1-201ENST00000416316 871 ntBASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCN8AQ9UQD0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
SCN8AQ9UQD0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCN8AQ9UQD0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.22■□□□□ 0.99
SCN8AQ9UQD0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCN8AQ9UQD0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCN8AQ9UQD0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCN8AQ9UQD0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCN8AQ9UQD0 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.22■□□□□ 0.99
SCN8AQ9UQD0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.22■□□□□ 0.99
SCN8AQ9UQD0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCN8AQ9UQD0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCN8AQ9UQD0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCN8AQ9UQD0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.21■□□□□ 0.99
SCN8AQ9UQD0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN8AQ9UQD0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.21■□□□□ 0.99
SCN8AQ9UQD0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.21■□□□□ 0.99
SCN8AQ9UQD0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN8AQ9UQD0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN8AQ9UQD0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN8AQ9UQD0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.21■□□□□ 0.99
SCN8AQ9UQD0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCN8AQ9UQD0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN8AQ9UQD0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SCN8AQ9UQD0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SCN8AQ9UQD0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
SCN8AQ9UQD0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.21■□□□□ 0.99
SCN8AQ9UQD0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.21■□□□□ 0.99
SCN8AQ9UQD0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SCN8AQ9UQD0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN8AQ9UQD0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms