Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MSL2Q9HCI7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MSL2Q9HCI7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
MSL2Q9HCI7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MSL2Q9HCI7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MSL2Q9HCI7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.3■□□□□ 0.52
MSL2Q9HCI7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.3■□□□□ 0.52
MSL2Q9HCI7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.3■□□□□ 0.52
MSL2Q9HCI7 AC005224.4-201ENST00000583262 1652 ntBASIC18.3■□□□□ 0.52
MSL2Q9HCI7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MSL2Q9HCI7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MSL2Q9HCI7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MSL2Q9HCI7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MSL2Q9HCI7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 CCDC92B-201ENST00000575506 885 ntBASIC18.29■□□□□ 0.52
MSL2Q9HCI7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSL2Q9HCI7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSL2Q9HCI7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSL2Q9HCI7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSL2Q9HCI7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.28■□□□□ 0.52
MSL2Q9HCI7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
MSL2Q9HCI7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSL2Q9HCI7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSL2Q9HCI7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSL2Q9HCI7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSL2Q9HCI7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSL2Q9HCI7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSL2Q9HCI7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSL2Q9HCI7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSL2Q9HCI7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSL2Q9HCI7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
MSL2Q9HCI7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
MSL2Q9HCI7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.27■□□□□ 0.52
MSL2Q9HCI7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.27■□□□□ 0.52
MSL2Q9HCI7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MSL2Q9HCI7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MSL2Q9HCI7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MSL2Q9HCI7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
MSL2Q9HCI7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.27■□□□□ 0.52
MSL2Q9HCI7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.27■□□□□ 0.52
MSL2Q9HCI7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.27■□□□□ 0.52
MSL2Q9HCI7 FAM99A-202ENST00000538190 1989 ntBASIC18.27■□□□□ 0.52
MSL2Q9HCI7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
MSL2Q9HCI7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MSL2Q9HCI7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MSL2Q9HCI7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
MSL2Q9HCI7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
MSL2Q9HCI7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.26■□□□□ 0.51
MSL2Q9HCI7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.26■□□□□ 0.51
MSL2Q9HCI7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MSL2Q9HCI7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.26■□□□□ 0.51
MSL2Q9HCI7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MSL2Q9HCI7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.26■□□□□ 0.51
MSL2Q9HCI7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
MSL2Q9HCI7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.26■□□□□ 0.51
MSL2Q9HCI7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MSL2Q9HCI7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.26■□□□□ 0.51
MSL2Q9HCI7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.26■□□□□ 0.51
MSL2Q9HCI7 KRT18P14-201ENST00000534205 1250 ntBASIC18.26■□□□□ 0.51
MSL2Q9HCI7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.26■□□□□ 0.51
MSL2Q9HCI7 TERF1P2-201ENST00000583350 1212 ntBASIC18.26■□□□□ 0.51
MSL2Q9HCI7 AP006587.3-201ENST00000525742 1516 ntBASIC18.26■□□□□ 0.51
MSL2Q9HCI7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MSL2Q9HCI7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
MSL2Q9HCI7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MSL2Q9HCI7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MSL2Q9HCI7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
MSL2Q9HCI7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSL2Q9HCI7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MSL2Q9HCI7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSL2Q9HCI7 AC026471.6-201ENST00000622954 1905 ntBASIC18.25■□□□□ 0.51
MSL2Q9HCI7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSL2Q9HCI7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSL2Q9HCI7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSL2Q9HCI7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MSL2Q9HCI7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSL2Q9HCI7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSL2Q9HCI7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.25■□□□□ 0.51
MSL2Q9HCI7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
MSL2Q9HCI7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms