Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC245100.8-202ENST00000629247 1058 ntBASIC21.97■■□□□ 1.11
FOXP3Q9BZS1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.97■■□□□ 1.11
FOXP3Q9BZS1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXP3Q9BZS1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.97■■□□□ 1.11
FOXP3Q9BZS1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
FOXP3Q9BZS1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
FOXP3Q9BZS1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.97■■□□□ 1.11
FOXP3Q9BZS1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.97■■□□□ 1.11
FOXP3Q9BZS1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXP3Q9BZS1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.97■■□□□ 1.11
FOXP3Q9BZS1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.97■■□□□ 1.11
FOXP3Q9BZS1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXP3Q9BZS1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXP3Q9BZS1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.96■■□□□ 1.11
FOXP3Q9BZS1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
FOXP3Q9BZS1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXP3Q9BZS1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXP3Q9BZS1 AC091305.1-201ENST00000479476 895 ntBASIC21.96■■□□□ 1.11
FOXP3Q9BZS1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.96■■□□□ 1.11
FOXP3Q9BZS1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.96■■□□□ 1.11
FOXP3Q9BZS1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXP3Q9BZS1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXP3Q9BZS1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.96■■□□□ 1.11
FOXP3Q9BZS1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
FOXP3Q9BZS1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 MIR5787-201ENST00000611784 55 ntBASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 OR7E47P-201ENST00000546390 1422 ntBASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXP3Q9BZS1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXP3Q9BZS1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
FOXP3Q9BZS1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.94■■□□□ 1.1
FOXP3Q9BZS1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
FOXP3Q9BZS1 AC068587.7-201ENST00000641602 218 ntBASIC21.94■■□□□ 1.1
FOXP3Q9BZS1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
FOXP3Q9BZS1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXP3Q9BZS1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXP3Q9BZS1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXP3Q9BZS1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXP3Q9BZS1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXP3Q9BZS1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
FOXP3Q9BZS1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
FOXP3Q9BZS1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.93■■□□□ 1.1
FOXP3Q9BZS1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.93■■□□□ 1.1
FOXP3Q9BZS1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXP3Q9BZS1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXP3Q9BZS1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
FOXP3Q9BZS1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXP3Q9BZS1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.93■■□□□ 1.1
FOXP3Q9BZS1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXP3Q9BZS1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
FOXP3Q9BZS1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXP3Q9BZS1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.92■■□□□ 1.1
FOXP3Q9BZS1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXP3Q9BZS1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXP3Q9BZS1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXP3Q9BZS1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXP3Q9BZS1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXP3Q9BZS1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.92■■□□□ 1.1
FOXP3Q9BZS1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
FOXP3Q9BZS1 AC008764.7-201ENST00000593779 1081 ntBASIC21.92■■□□□ 1.1
FOXP3Q9BZS1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
FOXP3Q9BZS1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXP3Q9BZS1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXP3Q9BZS1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
FOXP3Q9BZS1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
FOXP3Q9BZS1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.92■■□□□ 1.1
FOXP3Q9BZS1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXP3Q9BZS1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.91■■□□□ 1.1
FOXP3Q9BZS1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXP3Q9BZS1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXP3Q9BZS1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.91■■□□□ 1.1
FOXP3Q9BZS1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
FOXP3Q9BZS1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.9■■□□□ 1.1
FOXP3Q9BZS1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
FOXP3Q9BZS1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXP3Q9BZS1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.9■■□□□ 1.1
FOXP3Q9BZS1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
FOXP3Q9BZS1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.9■■□□□ 1.1
FOXP3Q9BZS1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.9■■□□□ 1.1
FOXP3Q9BZS1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXP3Q9BZS1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.9■■□□□ 1.1
FOXP3Q9BZS1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.9■■□□□ 1.1
FOXP3Q9BZS1 AC133637.1-201ENST00000624115 1537 ntBASIC21.9■■□□□ 1.1
FOXP3Q9BZS1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms