Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 OXCT2P1-201ENST00000447263 1535 ntBASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 Z92544.1-202ENST00000571933 1220 ntBASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 MTDHP2-201ENST00000601468 714 ntBASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
KRTAP3-1Q9BYR8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 AC006455.2-201ENST00000429931 906 ntBASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 AC010997.5-201ENST00000609182 354 ntBASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 AC003102.1-202ENST00000563394 1796 ntBASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-1Q9BYR8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 MIR4787-201ENST00000607364 84 ntBASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 pRNA.6-201ENST00000610482 90 ntBASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 pRNA.5-201ENST00000612139 90 ntBASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 pRNA.11-201ENST00000618423 90 ntBASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 pRNA.13-201ENST00000619112 90 ntBASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-1Q9BYR8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms