Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HDHD3Q9BSH5 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDHD3Q9BSH5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDHD3Q9BSH5 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HDHD3Q9BSH5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDHD3Q9BSH5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HDHD3Q9BSH5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HDHD3Q9BSH5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.98■□□□□ 0.47
HDHD3Q9BSH5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.98■□□□□ 0.47
HDHD3Q9BSH5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HDHD3Q9BSH5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HDHD3Q9BSH5 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.98■□□□□ 0.47
HDHD3Q9BSH5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDHD3Q9BSH5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HDHD3Q9BSH5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HDHD3Q9BSH5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.98■□□□□ 0.47
HDHD3Q9BSH5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.98■□□□□ 0.47
HDHD3Q9BSH5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDHD3Q9BSH5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HDHD3Q9BSH5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HDHD3Q9BSH5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HDHD3Q9BSH5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
HDHD3Q9BSH5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
HDHD3Q9BSH5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HDHD3Q9BSH5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HDHD3Q9BSH5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HDHD3Q9BSH5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.97■□□□□ 0.47
HDHD3Q9BSH5 OR2I1P-207ENST00000453522 948 ntBASIC17.97■□□□□ 0.47
HDHD3Q9BSH5 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.97■□□□□ 0.47
HDHD3Q9BSH5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.97■□□□□ 0.47
HDHD3Q9BSH5 AL356740.2-201ENST00000601559 647 ntBASIC17.97■□□□□ 0.47
HDHD3Q9BSH5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HDHD3Q9BSH5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HDHD3Q9BSH5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.96■□□□□ 0.47
HDHD3Q9BSH5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HDHD3Q9BSH5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HDHD3Q9BSH5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.96■□□□□ 0.47
HDHD3Q9BSH5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
HDHD3Q9BSH5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.96■□□□□ 0.47
HDHD3Q9BSH5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.96■□□□□ 0.47
HDHD3Q9BSH5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HDHD3Q9BSH5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HDHD3Q9BSH5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
HDHD3Q9BSH5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
HDHD3Q9BSH5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDHD3Q9BSH5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDHD3Q9BSH5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDHD3Q9BSH5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDHD3Q9BSH5 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.95■□□□□ 0.46
HDHD3Q9BSH5 MIR3621-201ENST00000580529 85 ntBASIC17.95■□□□□ 0.46
HDHD3Q9BSH5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HDHD3Q9BSH5 AL035685.1-201ENST00000636663 812 ntBASIC17.95■□□□□ 0.46
HDHD3Q9BSH5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDHD3Q9BSH5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
HDHD3Q9BSH5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDHD3Q9BSH5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDHD3Q9BSH5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDHD3Q9BSH5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDHD3Q9BSH5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HDHD3Q9BSH5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDHD3Q9BSH5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDHD3Q9BSH5 AC010141.3-201ENST00000456659 717 ntBASIC17.94■□□□□ 0.46
HDHD3Q9BSH5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.94■□□□□ 0.46
HDHD3Q9BSH5 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.94■□□□□ 0.46
HDHD3Q9BSH5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.94■□□□□ 0.46
HDHD3Q9BSH5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.94■□□□□ 0.46
HDHD3Q9BSH5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HDHD3Q9BSH5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.94■□□□□ 0.46
HDHD3Q9BSH5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.94■□□□□ 0.46
HDHD3Q9BSH5 AC068587.7-201ENST00000641602 218 ntBASIC17.94■□□□□ 0.46
HDHD3Q9BSH5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.94■□□□□ 0.46
HDHD3Q9BSH5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDHD3Q9BSH5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
HDHD3Q9BSH5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.94■□□□□ 0.46
HDHD3Q9BSH5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HDHD3Q9BSH5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HDHD3Q9BSH5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HDHD3Q9BSH5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HDHD3Q9BSH5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.93■□□□□ 0.46
HDHD3Q9BSH5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.93■□□□□ 0.46
HDHD3Q9BSH5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HDHD3Q9BSH5 AC087239.1-201ENST00000622671 572 ntBASIC17.93■□□□□ 0.46
HDHD3Q9BSH5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HDHD3Q9BSH5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HDHD3Q9BSH5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HDHD3Q9BSH5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HDHD3Q9BSH5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms