Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CMSS1Q9BQ75 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.14■□□□□ 0.5
CMSS1Q9BQ75 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CMSS1Q9BQ75 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.14■□□□□ 0.49
CMSS1Q9BQ75 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CMSS1Q9BQ75 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CMSS1Q9BQ75 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.14■□□□□ 0.49
CMSS1Q9BQ75 MIR6724-1-201ENST00000616420 92 ntBASIC18.14■□□□□ 0.49
CMSS1Q9BQ75 MIR6724-2-201ENST00000616483 92 ntBASIC18.14■□□□□ 0.49
CMSS1Q9BQ75 MIR6724-4-201ENST00000617390 92 ntBASIC18.14■□□□□ 0.49
CMSS1Q9BQ75 MIR6724-3-201ENST00000622482 92 ntBASIC18.14■□□□□ 0.49
CMSS1Q9BQ75 AL031602.1-201ENST00000633169 911 ntBASIC18.14■□□□□ 0.49
CMSS1Q9BQ75 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CMSS1Q9BQ75 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CMSS1Q9BQ75 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CMSS1Q9BQ75 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CMSS1Q9BQ75 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.14■□□□□ 0.49
CMSS1Q9BQ75 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CMSS1Q9BQ75 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CMSS1Q9BQ75 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CMSS1Q9BQ75 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CMSS1Q9BQ75 AC133637.1-201ENST00000624115 1537 ntBASIC18.13■□□□□ 0.49
CMSS1Q9BQ75 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CMSS1Q9BQ75 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CMSS1Q9BQ75 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CMSS1Q9BQ75 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CMSS1Q9BQ75 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CMSS1Q9BQ75 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CMSS1Q9BQ75 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CMSS1Q9BQ75 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.13■□□□□ 0.49
CMSS1Q9BQ75 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CMSS1Q9BQ75 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CMSS1Q9BQ75 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CMSS1Q9BQ75 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CMSS1Q9BQ75 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CMSS1Q9BQ75 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.12■□□□□ 0.49
CMSS1Q9BQ75 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CMSS1Q9BQ75 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CMSS1Q9BQ75 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CMSS1Q9BQ75 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CMSS1Q9BQ75 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CMSS1Q9BQ75 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.12■□□□□ 0.49
CMSS1Q9BQ75 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.12■□□□□ 0.49
CMSS1Q9BQ75 RARRES2P1-201ENST00000474487 481 ntBASIC18.12■□□□□ 0.49
CMSS1Q9BQ75 AC009299.2-201ENST00000482477 511 ntBASIC18.12■□□□□ 0.49
CMSS1Q9BQ75 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CMSS1Q9BQ75 AL451085.2-201ENST00000605085 799 ntBASIC18.12■□□□□ 0.49
CMSS1Q9BQ75 OR7E47P-201ENST00000546390 1422 ntBASIC18.12■□□□□ 0.49
CMSS1Q9BQ75 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.12■□□□□ 0.49
CMSS1Q9BQ75 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.12■□□□□ 0.49
CMSS1Q9BQ75 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.12■□□□□ 0.49
CMSS1Q9BQ75 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CMSS1Q9BQ75 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CMSS1Q9BQ75 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.11■□□□□ 0.49
CMSS1Q9BQ75 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CMSS1Q9BQ75 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CMSS1Q9BQ75 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CMSS1Q9BQ75 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CMSS1Q9BQ75 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.11■□□□□ 0.49
CMSS1Q9BQ75 AC104564.3-201ENST00000582367 638 ntBASIC18.11■□□□□ 0.49
CMSS1Q9BQ75 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.11■□□□□ 0.49
CMSS1Q9BQ75 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CMSS1Q9BQ75 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CMSS1Q9BQ75 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CMSS1Q9BQ75 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.11■□□□□ 0.49
CMSS1Q9BQ75 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 pRNA.6-201ENST00000610482 90 ntBASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 pRNA.5-201ENST00000612139 90 ntBASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 pRNA.11-201ENST00000618423 90 ntBASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 pRNA.13-201ENST00000619112 90 ntBASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CMSS1Q9BQ75 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CMSS1Q9BQ75 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CMSS1Q9BQ75 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.09■□□□□ 0.49
CMSS1Q9BQ75 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CMSS1Q9BQ75 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CMSS1Q9BQ75 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CMSS1Q9BQ75 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CMSS1Q9BQ75 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CMSS1Q9BQ75 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms