Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS2Q99743 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.79■□□□□ 0.92
NPAS2Q99743 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS2Q99743 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS2Q99743 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS2Q99743 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.79■□□□□ 0.92
NPAS2Q99743 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
NPAS2Q99743 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS2Q99743 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS2Q99743 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS2Q99743 AL157384.1-201ENST00000445995 2473 ntBASIC20.79■□□□□ 0.92
NPAS2Q99743 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NPAS2Q99743 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.78■□□□□ 0.92
NPAS2Q99743 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.78■□□□□ 0.92
NPAS2Q99743 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS2Q99743 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NPAS2Q99743 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS2Q99743 FEM1AP4-201ENST00000443167 1987 ntBASIC20.78■□□□□ 0.92
NPAS2Q99743 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.78■□□□□ 0.92
NPAS2Q99743 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS2Q99743 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS2Q99743 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS2Q99743 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS2Q99743 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS2Q99743 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.78■□□□□ 0.92
NPAS2Q99743 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS2Q99743 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.78■□□□□ 0.92
NPAS2Q99743 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
NPAS2Q99743 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS2Q99743 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.78■□□□□ 0.92
NPAS2Q99743 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NPAS2Q99743 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
NPAS2Q99743 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NPAS2Q99743 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS2Q99743 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS2Q99743 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.77■□□□□ 0.92
NPAS2Q99743 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NPAS2Q99743 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPAS2Q99743 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.77■□□□□ 0.92
NPAS2Q99743 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.77■□□□□ 0.92
NPAS2Q99743 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPAS2Q99743 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPAS2Q99743 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.77■□□□□ 0.92
NPAS2Q99743 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NPAS2Q99743 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NPAS2Q99743 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.77■□□□□ 0.92
NPAS2Q99743 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NPAS2Q99743 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NPAS2Q99743 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.77■□□□□ 0.92
NPAS2Q99743 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.77■□□□□ 0.92
NPAS2Q99743 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
NPAS2Q99743 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPAS2Q99743 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
NPAS2Q99743 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPAS2Q99743 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.77■□□□□ 0.91
NPAS2Q99743 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
NPAS2Q99743 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPAS2Q99743 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPAS2Q99743 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPAS2Q99743 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.76■□□□□ 0.91
NPAS2Q99743 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPAS2Q99743 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.76■□□□□ 0.91
NPAS2Q99743 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NPAS2Q99743 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.76■□□□□ 0.91
NPAS2Q99743 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPAS2Q99743 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPAS2Q99743 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NPAS2Q99743 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NPAS2Q99743 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
NPAS2Q99743 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.75■□□□□ 0.91
NPAS2Q99743 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPAS2Q99743 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.75■□□□□ 0.91
NPAS2Q99743 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPAS2Q99743 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.75■□□□□ 0.91
NPAS2Q99743 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.75■□□□□ 0.91
NPAS2Q99743 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.75■□□□□ 0.91
NPAS2Q99743 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NPAS2Q99743 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.75■□□□□ 0.91
NPAS2Q99743 AC136469.2-201ENST00000623944 1028 ntBASIC20.75■□□□□ 0.91
NPAS2Q99743 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPAS2Q99743 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPAS2Q99743 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NPAS2Q99743 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPAS2Q99743 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPAS2Q99743 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.75■□□□□ 0.91
NPAS2Q99743 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPAS2Q99743 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NPAS2Q99743 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NPAS2Q99743 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NPAS2Q99743 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
NPAS2Q99743 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPAS2Q99743 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
NPAS2Q99743 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPAS2Q99743 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NPAS2Q99743 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.74■□□□□ 0.91
NPAS2Q99743 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.74■□□□□ 0.91
NPAS2Q99743 pRNA.6-201ENST00000610482 90 ntBASIC20.74■□□□□ 0.91
NPAS2Q99743 pRNA.5-201ENST00000612139 90 ntBASIC20.74■□□□□ 0.91
NPAS2Q99743 pRNA.11-201ENST00000618423 90 ntBASIC20.74■□□□□ 0.91
NPAS2Q99743 pRNA.13-201ENST00000619112 90 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms