Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 CUE3YGL110C 1875 nt2.48□□□□□ -2.01
ATG40Q99325 MSA1YOR066W 1890 nt2.48□□□□□ -2.01
ATG40Q99325 YPL109CYPL109C 1974 nt2.47□□□□□ -2.01
ATG40Q99325 YKL222CYKL222C 2118 nt2.47□□□□□ -2.01
ATG40Q99325 STP2YHR006W 1626 nt2.47□□□□□ -2.01
ATG40Q99325 ESL2YKR096W 3588 nt2.47□□□□□ -2.01
ATG40Q99325 snR57snR57 88 nt2.47□□□□□ -2.01
ATG40Q99325 PEX10YDR265W 1014 nt2.47□□□□□ -2.01
ATG40Q99325 PNC1YGL037C 651 nt2.47□□□□□ -2.01
ATG40Q99325 YGL063C-AYGL063C-A 150 nt2.47□□□□□ -2.01
ATG40Q99325 YGR149WYGR149W 1299 nt2.47□□□□□ -2.01
ATG40Q99325 YVH1YIR026C 1095 nt2.47□□□□□ -2.01
ATG40Q99325 ERP1YAR002C-A 660 nt2.47□□□□□ -2.01
ATG40Q99325 HSH49YOR319W 642 nt2.47□□□□□ -2.01
ATG40Q99325 NDT80YHR124W 1884 nt2.47□□□□□ -2.01
ATG40Q99325 DBP7YKR024C 2229 nt2.46□□□□□ -2.01
ATG40Q99325 YPR148CYPR148C 1308 nt2.46□□□□□ -2.02
ATG40Q99325 YDR089WYDR089W 2610 nt2.46□□□□□ -2.02
ATG40Q99325 STP1YDR463W 1560 nt2.46□□□□□ -2.02
ATG40Q99325 ERG11YHR007C 1593 nt2.46□□□□□ -2.02
ATG40Q99325 YGR107WYGR107W 450 nt2.46□□□□□ -2.02
ATG40Q99325 YIL169CYIL169C 2988 nt2.46□□□□□ -2.02
ATG40Q99325 YLR154C-HYLR154C-H 132 nt2.46□□□□□ -2.02
ATG40Q99325 YLR156C-AYLR156C-A 132 nt2.46□□□□□ -2.02
ATG40Q99325 YLR157C-CYLR157C-C 132 nt2.46□□□□□ -2.02
ATG40Q99325 YLR159C-AYLR159C-A 132 nt2.46□□□□□ -2.02
ATG40Q99325 YBR096WYBR096W 693 nt2.46□□□□□ -2.02
ATG40Q99325 TPD3YAL016W 1908 nt2.46□□□□□ -2.02
ATG40Q99325 TFC4YGR047C 3078 nt2.45□□□□□ -2.02
ATG40Q99325 SRB8YCR081W 4284 nt2.45□□□□□ -2.02
ATG40Q99325 PMS1YNL082W 2622 nt2.45□□□□□ -2.02
ATG40Q99325 YPK3YBR028C 1578 nt2.45□□□□□ -2.02
ATG40Q99325 TOP1YOL006C 2310 nt2.45□□□□□ -2.02
ATG40Q99325 MSS2YDL107W 1056 nt2.45□□□□□ -2.02
ATG40Q99325 SHU2YDR078C 672 nt2.45□□□□□ -2.02
ATG40Q99325 YER165C-AYER165C-A 357 nt2.45□□□□□ -2.02
ATG40Q99325 PEX21YGR239C 867 nt2.45□□□□□ -2.02
ATG40Q99325 MED11YMR112C 396 nt2.45□□□□□ -2.02
ATG40Q99325 RPL13BYMR142C 600 nt2.45□□□□□ -2.02
ATG40Q99325 YPR050CYPR050C 414 nt2.45□□□□□ -2.02
ATG40Q99325 YBR116CYBR116C 528 nt2.45□□□□□ -2.02
ATG40Q99325 RAX2YLR084C 3663 nt2.45□□□□□ -2.02
ATG40Q99325 BCS1YDR375C 1371 nt2.45□□□□□ -2.02
ATG40Q99325 ILS1YBL076C 3219 nt2.45□□□□□ -2.02
ATG40Q99325 CEP3YMR168C 1827 nt2.45□□□□□ -2.02
ATG40Q99325 TLC1TLC1 1301 nt2.44□□□□□ -2.02
ATG40Q99325 RRP8YDR083W 1179 nt2.44□□□□□ -2.02
ATG40Q99325 AST2YER101C 1293 nt2.44□□□□□ -2.02
ATG40Q99325 APC9YLR102C 798 nt2.44□□□□□ -2.02
ATG40Q99325 SMA2YML066C 1110 nt2.44□□□□□ -2.02
ATG40Q99325 MCA1YOR197W 1299 nt2.44□□□□□ -2.02
ATG40Q99325 LCB4YOR171C 1875 nt2.43□□□□□ -2.02
ATG40Q99325 YKR015CYKR015C 1707 nt2.43□□□□□ -2.02
ATG40Q99325 OAF3YKR064W 2592 nt2.43□□□□□ -2.02
ATG40Q99325 YME2YMR302C 2553 nt2.43□□□□□ -2.02
ATG40Q99325 GRX3YDR098C 858 nt2.43□□□□□ -2.02
ATG40Q99325 TLG1YDR468C 675 nt2.43□□□□□ -2.02
ATG40Q99325 YDR491CYDR491C 492 nt2.43□□□□□ -2.02
ATG40Q99325 YHR069C-AYHR069C-A 363 nt2.43□□□□□ -2.02
ATG40Q99325 BUR2YLR226W 1188 nt2.43□□□□□ -2.02
ATG40Q99325 YMR141CYMR141C 309 nt2.43□□□□□ -2.02
ATG40Q99325 RPL33AYPL143W 324 nt2.43□□□□□ -2.02
ATG40Q99325 TIF4631YGR162W 2859 nt2.43□□□□□ -2.02
ATG40Q99325 MGR3YMR115W 1506 nt2.42□□□□□ -2.02
ATG40Q99325 SEC27YGL137W 2670 nt2.42□□□□□ -2.02
ATG40Q99325 TEC1YBR083W 1461 nt2.42□□□□□ -2.02
ATG40Q99325 RIM1YCR028C-A 408 nt2.42□□□□□ -2.02
ATG40Q99325 YDL162CYDL162C 357 nt2.42□□□□□ -2.02
ATG40Q99325 MRH1YDR033W 963 nt2.42□□□□□ -2.02
ATG40Q99325 RAD55YDR076W 1221 nt2.42□□□□□ -2.02
ATG40Q99325 RPL23BYER117W 414 nt2.42□□□□□ -2.02
ATG40Q99325 KXD1YGL079W 657 nt2.42□□□□□ -2.02
ATG40Q99325 RPS21BYJL136C 264 nt2.42□□□□□ -2.02
ATG40Q99325 YLR297WYLR297W 390 nt2.42□□□□□ -2.02
ATG40Q99325 NIT3YLR351C 876 nt2.42□□□□□ -2.02
ATG40Q99325 TEM1YML064C 738 nt2.42□□□□□ -2.02
ATG40Q99325 YMR316C-AYMR316C-A 312 nt2.42□□□□□ -2.02
ATG40Q99325 VPS28YPL065W 729 nt2.42□□□□□ -2.02
ATG40Q99325 EMP70YLR083C 2004 nt2.42□□□□□ -2.02
ATG40Q99325 BEM4YPL161C 1902 nt2.42□□□□□ -2.02
ATG40Q99325 PAF1YBR279W 1338 nt2.42□□□□□ -2.02
ATG40Q99325 HAP4YKL109W 1665 nt2.41□□□□□ -2.02
ATG40Q99325 GYP7YDL234C 2241 nt2.41□□□□□ -2.02
ATG40Q99325 DSF2YBR007C 2211 nt2.41□□□□□ -2.02
ATG40Q99325 MET5YJR137C 4329 nt2.41□□□□□ -2.02
ATG40Q99325 YOS1YER074W-A 258 nt2.41□□□□□ -2.02
ATG40Q99325 SSU72YNL222W 621 nt2.41□□□□□ -2.02
ATG40Q99325 YOR385WYOR385W 873 nt2.41□□□□□ -2.02
ATG40Q99325 CDC20YGL116W 1833 nt2.4□□□□□ -2.02
ATG40Q99325 YIG1YPL201C 1386 nt2.4□□□□□ -2.02
ATG40Q99325 TFC1YBR123C 1950 nt2.4□□□□□ -2.02
ATG40Q99325 CCM1YGR150C 2595 nt2.4□□□□□ -2.02
ATG40Q99325 CBP2YHL038C 1893 nt2.4□□□□□ -2.03
ATG40Q99325 CLB3YDL155W 1284 nt2.4□□□□□ -2.03
ATG40Q99325 TGL2YDR058C 981 nt2.4□□□□□ -2.03
ATG40Q99325 IRC6YFR043C 714 nt2.4□□□□□ -2.03
ATG40Q99325 AML1YGR001C 747 nt2.4□□□□□ -2.03
ATG40Q99325 YGR204C-AYGR204C-A 114 nt2.4□□□□□ -2.03
ATG40Q99325 MTM1YGR257C 1101 nt2.4□□□□□ -2.03
ATG40Q99325 YHR214C-DYHR214C-D 294 nt2.4□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 25.7 ms