Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CRAMP1Q96RY5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CRAMP1Q96RY5 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.37■■□□□ 1.81
CRAMP1Q96RY5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CRAMP1Q96RY5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CRAMP1Q96RY5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
CRAMP1Q96RY5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CRAMP1Q96RY5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CRAMP1Q96RY5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC26.37■■□□□ 1.81
CRAMP1Q96RY5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
CRAMP1Q96RY5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
CRAMP1Q96RY5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CRAMP1Q96RY5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CRAMP1Q96RY5 PRORSD1P-201ENST00000295112 541 ntBASIC26.36■■□□□ 1.81
CRAMP1Q96RY5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
CRAMP1Q96RY5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.36■■□□□ 1.81
CRAMP1Q96RY5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.36■■□□□ 1.81
CRAMP1Q96RY5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC26.36■■□□□ 1.81
CRAMP1Q96RY5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC26.36■■□□□ 1.81
CRAMP1Q96RY5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.36■■□□□ 1.81
CRAMP1Q96RY5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC26.36■■□□□ 1.81
CRAMP1Q96RY5 AC008175.2-201ENST00000612840 297 ntBASIC26.36■■□□□ 1.81
CRAMP1Q96RY5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.36■■□□□ 1.81
CRAMP1Q96RY5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26.35■■□□□ 1.81
CRAMP1Q96RY5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
CRAMP1Q96RY5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.35■■□□□ 1.81
CRAMP1Q96RY5 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CRAMP1Q96RY5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CRAMP1Q96RY5 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CRAMP1Q96RY5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC26.35■■□□□ 1.81
CRAMP1Q96RY5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CRAMP1Q96RY5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC26.35■■□□□ 1.81
CRAMP1Q96RY5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
CRAMP1Q96RY5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC26.35■■□□□ 1.81
CRAMP1Q96RY5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.35■■□□□ 1.81
CRAMP1Q96RY5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
CRAMP1Q96RY5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC26.35■■□□□ 1.81
CRAMP1Q96RY5 AC120498.10-201ENST00000621827 505 ntBASIC26.35■■□□□ 1.81
CRAMP1Q96RY5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.35■■□□□ 1.81
CRAMP1Q96RY5 MYC-209ENST00000641252 345 ntBASIC26.35■■□□□ 1.81
CRAMP1Q96RY5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.34■■□□□ 1.81
CRAMP1Q96RY5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
CRAMP1Q96RY5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CRAMP1Q96RY5 POU5F1P4-201ENST00000413175 1085 ntBASIC26.34■■□□□ 1.81
CRAMP1Q96RY5 BX276092.2-201ENST00000417668 665 ntBASIC26.34■■□□□ 1.81
CRAMP1Q96RY5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC26.34■■□□□ 1.81
CRAMP1Q96RY5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC26.34■■□□□ 1.81
CRAMP1Q96RY5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC26.34■■□□□ 1.81
CRAMP1Q96RY5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CRAMP1Q96RY5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CRAMP1Q96RY5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.34■■□□□ 1.81
CRAMP1Q96RY5 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CRAMP1Q96RY5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.33■■□□□ 1.81
CRAMP1Q96RY5 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CRAMP1Q96RY5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
CRAMP1Q96RY5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CRAMP1Q96RY5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC26.33■■□□□ 1.81
CRAMP1Q96RY5 AL162412.1-201ENST00000567129 965 ntBASIC26.33■■□□□ 1.81
CRAMP1Q96RY5 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC26.33■■□□□ 1.81
CRAMP1Q96RY5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC26.33■■□□□ 1.81
CRAMP1Q96RY5 AC083880.1-201ENST00000608266 535 ntBASIC26.33■■□□□ 1.81
CRAMP1Q96RY5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
CRAMP1Q96RY5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CRAMP1Q96RY5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CRAMP1Q96RY5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CRAMP1Q96RY5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CRAMP1Q96RY5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CRAMP1Q96RY5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
CRAMP1Q96RY5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
CRAMP1Q96RY5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CRAMP1Q96RY5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26.32■■□□□ 1.8
CRAMP1Q96RY5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.32■■□□□ 1.8
CRAMP1Q96RY5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CRAMP1Q96RY5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CRAMP1Q96RY5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC26.31■■□□□ 1.8
CRAMP1Q96RY5 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CRAMP1Q96RY5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CRAMP1Q96RY5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
CRAMP1Q96RY5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CRAMP1Q96RY5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC26.31■■□□□ 1.8
CRAMP1Q96RY5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.31■■□□□ 1.8
CRAMP1Q96RY5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.31■■□□□ 1.8
CRAMP1Q96RY5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CRAMP1Q96RY5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC26.31■■□□□ 1.8
CRAMP1Q96RY5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CRAMP1Q96RY5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CRAMP1Q96RY5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CRAMP1Q96RY5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CRAMP1Q96RY5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CRAMP1Q96RY5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC26.3■■□□□ 1.8
CRAMP1Q96RY5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CRAMP1Q96RY5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC26.3■■□□□ 1.8
CRAMP1Q96RY5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CRAMP1Q96RY5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC26.3■■□□□ 1.8
CRAMP1Q96RY5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CRAMP1Q96RY5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CRAMP1Q96RY5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CRAMP1Q96RY5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.29■■□□□ 1.8
CRAMP1Q96RY5 AC097658.1-201ENST00000475555 843 ntBASIC26.29■■□□□ 1.8
CRAMP1Q96RY5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms