Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CFAP54Q96N23 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CFAP54Q96N23 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.16■□□□□ 0.98
CFAP54Q96N23 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.16■□□□□ 0.98
CFAP54Q96N23 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CFAP54Q96N23 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CFAP54Q96N23 AL049597.2-201ENST00000565575 961 ntBASIC21.16■□□□□ 0.98
CFAP54Q96N23 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CFAP54Q96N23 TSPY15P-201ENST00000457163 923 ntBASIC21.15■□□□□ 0.98
CFAP54Q96N23 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.15■□□□□ 0.98
CFAP54Q96N23 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CFAP54Q96N23 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.15■□□□□ 0.98
CFAP54Q96N23 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.15■□□□□ 0.98
CFAP54Q96N23 CYP2T3P-201ENST00000601990 817 ntBASIC21.15■□□□□ 0.98
CFAP54Q96N23 AC016405.3-201ENST00000607710 860 ntBASIC21.15■□□□□ 0.98
CFAP54Q96N23 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CFAP54Q96N23 AC087499.1-201ENST00000418141 1075 ntBASIC21.15■□□□□ 0.98
CFAP54Q96N23 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.15■□□□□ 0.98
CFAP54Q96N23 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.15■□□□□ 0.98
CFAP54Q96N23 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.14■□□□□ 0.98
CFAP54Q96N23 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
CFAP54Q96N23 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CFAP54Q96N23 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.98
CFAP54Q96N23 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CFAP54Q96N23 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CFAP54Q96N23 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CFAP54Q96N23 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CFAP54Q96N23 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.14■□□□□ 0.97
CFAP54Q96N23 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CFAP54Q96N23 AC055733.4-201ENST00000638462 1354 ntBASIC21.13■□□□□ 0.97
CFAP54Q96N23 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP54Q96N23 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP54Q96N23 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.13■□□□□ 0.97
CFAP54Q96N23 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP54Q96N23 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP54Q96N23 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP54Q96N23 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.13■□□□□ 0.97
CFAP54Q96N23 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CFAP54Q96N23 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP54Q96N23 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP54Q96N23 AC145676.1-201ENST00000514988 2004 ntBASIC21.13■□□□□ 0.97
CFAP54Q96N23 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP54Q96N23 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.13■□□□□ 0.97
CFAP54Q96N23 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.13■□□□□ 0.97
CFAP54Q96N23 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP54Q96N23 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CFAP54Q96N23 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP54Q96N23 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP54Q96N23 AC233263.1-201ENST00000578059 224 ntBASIC21.12■□□□□ 0.97
CFAP54Q96N23 AC005224.4-201ENST00000583262 1652 ntBASIC21.12■□□□□ 0.97
CFAP54Q96N23 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP54Q96N23 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP54Q96N23 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.12■□□□□ 0.97
CFAP54Q96N23 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP54Q96N23 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.12■□□□□ 0.97
CFAP54Q96N23 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP54Q96N23 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.11■□□□□ 0.97
CFAP54Q96N23 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CFAP54Q96N23 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.11■□□□□ 0.97
CFAP54Q96N23 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CFAP54Q96N23 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CFAP54Q96N23 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CFAP54Q96N23 AC020928.2-201ENST00000588717 2197 ntBASIC21.11■□□□□ 0.97
CFAP54Q96N23 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CFAP54Q96N23 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.11■□□□□ 0.97
CFAP54Q96N23 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.11■□□□□ 0.97
CFAP54Q96N23 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.1■□□□□ 0.97
CFAP54Q96N23 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.1■□□□□ 0.97
CFAP54Q96N23 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CFAP54Q96N23 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CFAP54Q96N23 TSPY7P-201ENST00000431358 1114 ntBASIC21.1■□□□□ 0.97
CFAP54Q96N23 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
CFAP54Q96N23 TERF1P5-201ENST00000477545 1207 ntBASIC21.1■□□□□ 0.97
CFAP54Q96N23 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.1■□□□□ 0.97
CFAP54Q96N23 ABCB10P4-201ENST00000566803 2184 ntBASIC21.1■□□□□ 0.97
CFAP54Q96N23 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.1■□□□□ 0.97
CFAP54Q96N23 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CFAP54Q96N23 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CFAP54Q96N23 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CFAP54Q96N23 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CFAP54Q96N23 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CFAP54Q96N23 RN7SL471P-201ENST00000580476 299 ntBASIC21.1■□□□□ 0.97
CFAP54Q96N23 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.1■□□□□ 0.97
CFAP54Q96N23 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.09■□□□□ 0.97
CFAP54Q96N23 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CFAP54Q96N23 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CFAP54Q96N23 DUSP8P5-201ENST00000422884 1815 ntBASIC21.09■□□□□ 0.97
CFAP54Q96N23 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CFAP54Q96N23 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CFAP54Q96N23 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CFAP54Q96N23 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CFAP54Q96N23 LINC01529-204ENST00000636474 1715 ntBASIC21.09■□□□□ 0.97
CFAP54Q96N23 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.08■□□□□ 0.97
CFAP54Q96N23 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.08■□□□□ 0.97
CFAP54Q96N23 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CFAP54Q96N23 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.08■□□□□ 0.97
CFAP54Q96N23 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
CFAP54Q96N23 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.08■□□□□ 0.97
CFAP54Q96N23 KRT17P2-201ENST00000300992 1314 ntBASIC21.08■□□□□ 0.97
CFAP54Q96N23 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms