| PGAP3 | Q96FM1 | AC079140.4-201 | ENST00000507448 | 529 nt | BASIC | 22.14 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | SFTPC-205 | ENST00000521315 | 1046 nt | APPRIS ALT1 TSL 1 (best) BASIC | 22.14 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | DUX4L2-201 | ENST00000561772 | 1275 nt | BASIC | 22.14 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | AC087623.3-201 | ENST00000607047 | 1098 nt | BASIC | 22.14 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | DUX4-206 | ENST00000616166 | 1275 nt | APPRIS P2 BASIC | 22.14 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | DUX4L6-201 | ENST00000626483 | 1275 nt | BASIC | 22.14 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | DUX4L1-201 | ENST00000627662 | 1275 nt | BASIC | 22.14 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | DUX4L8-201 | ENST00000629013 | 1275 nt | BASIC | 22.14 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | DUX4L3-201 | ENST00000630187 | 1275 nt | BASIC | 22.14 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | DUX4L7-201 | ENST00000630678 | 1275 nt | BASIC | 22.14 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | DUX4L5-201 | ENST00000630834 | 1275 nt | BASIC | 22.14 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | GJB6-203 | ENST00000400065 | 1805 nt | APPRIS P1 TSL 1 (best) BASIC | 22.14 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | FAM72A-202 | ENST00000367128 | 2398 nt | APPRIS P1 TSL 1 (best) BASIC | 22.14 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | FAM72D-201 | ENST00000400889 | 2397 nt | APPRIS P1 TSL 1 (best) BASIC | 22.14 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | FAM19A5-202 | ENST00000358295 | 2638 nt | APPRIS P1 TSL 2 BASIC | 22.14 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | HOXA10-201 | ENST00000283921 | 2541 nt | APPRIS P2 TSL 1 (best) BASIC | 22.14 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | DTNBP1-201 | ENST00000338950 | 1880 nt | TSL 1 (best) BASIC | 22.13 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | PHACTR2-208 | ENST00000440869 | 2569 nt | APPRIS ALT2 TSL 2 BASIC | 22.13 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | MANEAL-203 | ENST00000397631 | 2327 nt | TSL 1 (best) BASIC | 22.13 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | JAG2-202 | ENST00000347004 | 5720 nt | TSL 1 (best) BASIC | 22.13 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | RHOT1-205 | ENST00000545287 | 2516 nt | APPRIS P4 TSL 5 BASIC | 22.13 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | ACYP2-201 | ENST00000303536 | 789 nt | TSL 2 BASIC | 22.13 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | METTL23-201 | ENST00000341249 | 1155 nt | APPRIS P1 TSL 1 (best) BASIC | 22.13 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | DCTD-201 | ENST00000357067 | 1931 nt | TSL 1 (best) BASIC | 22.13 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | TMEM9B-201 | ENST00000309134 | 1659 nt | TSL 1 (best) BASIC | 22.13 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | KCNH6-203 | ENST00000580652 | 1703 nt | TSL 1 (best) BASIC | 22.12 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | RFLNA-201 | ENST00000324038 | 2148 nt | APPRIS P2 TSL 2 BASIC | 22.12 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | ORAI1-202 | ENST00000617316 | 2138 nt | APPRIS P1 TSL 1 (best) BASIC | 22.12 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | SKIDA1-201 | ENST00000444772 | 2667 nt | APPRIS ALT2 TSL 5 BASIC | 22.12 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | SH2D3A-201 | ENST00000245908 | 2296 nt | APPRIS P1 TSL 1 (best) BASIC | 22.12 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | AC073188.6-202 | ENST00000616616 | 2281 nt | TSL 1 (best) BASIC | 22.12 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | SLC35A2-205 | ENST00000376529 | 865 nt | TSL 3 BASIC | 22.12 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | FOXB2-201 | ENST00000376708 | 1299 nt | APPRIS P1 BASIC | 22.12 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | AC034268.1-201 | ENST00000441047 | 882 nt | BASIC | 22.12 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | AC092468.1-201 | ENST00000491321 | 562 nt | TSL 4 BASIC | 22.12 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | AP002748.1-201 | ENST00000504911 | 580 nt | TSL 3 BASIC | 22.12 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | FRMD8-208 | ENST00000531296 | 366 nt | TSL 1 (best) BASIC | 22.12 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | AC104564.3-201 | ENST00000582367 | 638 nt | BASIC | 22.12 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | FMR1-AS1-202 | ENST00000596112 | 1845 nt | TSL 1 (best) BASIC | 22.12 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | DACT2-203 | ENST00000607983 | 1620 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22.12 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | DCAF8-211 | ENST00000475733 | 1426 nt | TSL 1 (best) BASIC | 22.12 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | ST3GAL4-201 | ENST00000227495 | 1790 nt | APPRIS P3 TSL 5 BASIC | 22.12 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | CERKL-204 | ENST00000374970 | 1392 nt | TSL 1 (best) BASIC | 22.12 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | SCRN2-212 | ENST00000584123 | 1745 nt | TSL 1 (best) BASIC | 22.11 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | ADRM1-204 | ENST00000491935 | 1530 nt | APPRIS P1 TSL 5 BASIC | 22.11 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | CACNB3-205 | ENST00000547392 | 2237 nt | TSL 5 BASIC | 22.11 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | PAXBP1-201 | ENST00000290178 | 2564 nt | TSL 1 (best) BASIC | 22.11 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | RAB28-208 | ENST00000630951 | 1679 nt | TSL 5 BASIC | 22.11 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | NRG3-201 | ENST00000372141 | 2158 nt | APPRIS P3 TSL 1 (best) BASIC | 22.11 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | CENPS-CORT-201 | ENST00000400900 | 1469 nt | TSL 2 BASIC | 22.11 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | KRT87P-202 | ENST00000534226 | 1464 nt | BASIC | 22.11 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | PRR25-201 | ENST00000301698 | 1209 nt | APPRIS P1 TSL 1 (best) BASIC | 22.11 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | BCKDHB-203 | ENST00000369760 | 743 nt | TSL 3 BASIC | 22.11 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | NDUFB2-207 | ENST00000465506 | 1101 nt | APPRIS P1 TSL 1 (best) BASIC | 22.11 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | ATP6V0B-204 | ENST00000471859 | 865 nt | TSL 5 BASIC | 22.11 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | LINC01942-201 | ENST00000521373 | 513 nt | TSL 4 BASIC | 22.11 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | EEF1DP3-203 | ENST00000566025 | 782 nt | BASIC | 22.11 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | HIST1H2AL-201 | ENST00000613174 | 393 nt | APPRIS P1 BASIC | 22.11 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | ILDR2-205 | ENST00000526687 | 2299 nt | TSL 5 BASIC | 22.11 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | SLC2A11-202 | ENST00000316185 | 1555 nt | TSL 1 (best) BASIC | 22.11 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | EPHA8-202 | ENST00000374644 | 1802 nt | TSL 1 (best) BASIC | 22.1 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | FAHD1-202 | ENST00000382668 | 1845 nt | TSL 1 (best) BASIC | 22.1 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | CNTFR-202 | ENST00000378980 | 2052 nt | APPRIS P1 TSL 1 (best) BASIC | 22.1 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | AC113189.4-201 | ENST00000575331 | 5553 nt | TSL 1 (best) BASIC | 22.1 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | TPSG1-201 | ENST00000234798 | 1108 nt | APPRIS P1 TSL 1 (best) BASIC | 22.1 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | TMEM70-203 | ENST00000517439 | 617 nt | TSL 2 BASIC | 22.1 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | FAXDC2-211 | ENST00000520968 | 558 nt | TSL 4 BASIC | 22.1 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | COMMD5-207 | ENST00000543949 | 1571 nt | APPRIS P1 TSL 3 BASIC | 22.1 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | MEF2A-207 | ENST00000558812 | 2186 nt | TSL 2 BASIC | 22.1 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | AL512625.3-202 | ENST00000591993 | 1091 nt | TSL 1 (best) BASIC | 22.1 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | ST7-201 | ENST00000265437 | 2899 nt | TSL 1 (best) BASIC | 22.1 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | LOXL1-201 | ENST00000261921 | 2351 nt | APPRIS P1 TSL 1 (best) BASIC | 22.1 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | RNF149-201 | ENST00000295317 | 2458 nt | APPRIS P1 TSL 1 (best) BASIC | 22.09 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | LINC00565-201 | ENST00000562710 | 2331 nt | BASIC | 22.09 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | EPO-201 | ENST00000252723 | 1330 nt | APPRIS P1 TSL 1 (best) BASIC | 22.09 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | PDIA6-207 | ENST00000540494 | 2509 nt | APPRIS ALT1 TSL 2 BASIC | 22.09 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | BID-212 | ENST00000614949 | 1988 nt | TSL 5 BASIC | 22.09 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | GZMM-201 | ENST00000264553 | 940 nt | APPRIS P1 TSL 1 (best) BASIC | 22.09 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | HACD1-201 | ENST00000326961 | 773 nt | TSL 2 BASIC | 22.09 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | NRL-201 | ENST00000396995 | 810 nt | TSL 1 (best) BASIC | 22.09 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | AC053503.5-201 | ENST00000601508 | 636 nt | BASIC | 22.09 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | TMEM182-210 | ENST00000639249 | 1025 nt | TSL 5 BASIC | 22.09 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | PSPH-202 | ENST00000395471 | 2178 nt | APPRIS P1 TSL 1 (best) BASIC | 22.09 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | NOC4L-201 | ENST00000330579 | 1632 nt | APPRIS P1 TSL 1 (best) BASIC | 22.09 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | ME2-206 | ENST00000638410 | 2289 nt | TSL 5 BASIC | 22.09 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | ME2-210 | ENST00000639255 | 2262 nt | TSL 5 BASIC | 22.09 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | FARP2-223 | ENST00000627550 | 2122 nt | TSL 2 BASIC | 22.09 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | HSD11B1L-201 | ENST00000301382 | 1457 nt | TSL 1 (best) BASIC | 22.09 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | HERC2P8-204 | ENST00000567073 | 1988 nt | TSL 5 BASIC | 22.08 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | POTEC-204 | ENST00000620346 | 1988 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22.08 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | AC004980.1-201 | ENST00000418663 | 2667 nt | TSL 1 (best) BASIC | 22.08 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | ZSCAN18-217 | ENST00000601144 | 2190 nt | APPRIS P3 TSL 1 (best) BASIC | 22.08 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | TTYH1-203 | ENST00000376531 | 1763 nt | TSL 1 (best) BASIC | 22.08 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | POFUT1-201 | ENST00000375730 | 1507 nt | TSL 1 (best) BASIC | 22.08 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | MIR31HG-201 | ENST00000304425 | 745 nt | TSL 2 BASIC | 22.08 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | ZNF843-201 | ENST00000315678 | 2137 nt | APPRIS P2 TSL 2 BASIC | 22.08 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | BRD2-214 | ENST00000496118 | 735 nt | TSL 1 (best) BASIC | 22.08 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | PYCARD-AS1-201 | ENST00000561916 | 1095 nt | TSL 2 BASIC | 22.08 | ■■□□□ 1.13 | | |
| PGAP3 | Q96FM1 | TDRKH-205 | ENST00000368827 | 2318 nt | APPRIS P2 TSL 1 (best) BASIC | 22.08 | ■■□□□ 1.12 | | |
| PGAP3 | Q96FM1 | B3GALT6-201 | ENST00000379198 | 2777 nt | APPRIS P1 BASIC | 22.08 | ■■□□□ 1.12 | | |