Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATL1Q8WXF7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATL1Q8WXF7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ATL1Q8WXF7 AC010542.4-201ENST00000563151 1910 ntBASIC20.82■□□□□ 0.92
ATL1Q8WXF7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATL1Q8WXF7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATL1Q8WXF7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
ATL1Q8WXF7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATL1Q8WXF7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATL1Q8WXF7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.81■□□□□ 0.92
ATL1Q8WXF7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATL1Q8WXF7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATL1Q8WXF7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ATL1Q8WXF7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATL1Q8WXF7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATL1Q8WXF7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATL1Q8WXF7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATL1Q8WXF7 AC009237.3-201ENST00000393279 1427 ntBASIC20.8■□□□□ 0.92
ATL1Q8WXF7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
ATL1Q8WXF7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATL1Q8WXF7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATL1Q8WXF7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ATL1Q8WXF7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATL1Q8WXF7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATL1Q8WXF7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.8■□□□□ 0.92
ATL1Q8WXF7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.8■□□□□ 0.92
ATL1Q8WXF7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
ATL1Q8WXF7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATL1Q8WXF7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.8■□□□□ 0.92
ATL1Q8WXF7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATL1Q8WXF7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.8■□□□□ 0.92
ATL1Q8WXF7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATL1Q8WXF7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATL1Q8WXF7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ATL1Q8WXF7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.79■□□□□ 0.92
ATL1Q8WXF7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATL1Q8WXF7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATL1Q8WXF7 MIR638-201ENST00000385237 100 ntBASIC20.79■□□□□ 0.92
ATL1Q8WXF7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.79■□□□□ 0.92
ATL1Q8WXF7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.79■□□□□ 0.92
ATL1Q8WXF7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATL1Q8WXF7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.79■□□□□ 0.92
ATL1Q8WXF7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ATL1Q8WXF7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.79■□□□□ 0.92
ATL1Q8WXF7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.79■□□□□ 0.92
ATL1Q8WXF7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.79■□□□□ 0.92
ATL1Q8WXF7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATL1Q8WXF7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.78■□□□□ 0.92
ATL1Q8WXF7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATL1Q8WXF7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATL1Q8WXF7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
ATL1Q8WXF7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATL1Q8WXF7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATL1Q8WXF7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.78■□□□□ 0.92
ATL1Q8WXF7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.78■□□□□ 0.92
ATL1Q8WXF7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ATL1Q8WXF7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.78■□□□□ 0.92
ATL1Q8WXF7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATL1Q8WXF7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATL1Q8WXF7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATL1Q8WXF7 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.78■□□□□ 0.92
ATL1Q8WXF7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATL1Q8WXF7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.77■□□□□ 0.92
ATL1Q8WXF7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ATL1Q8WXF7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATL1Q8WXF7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.77■□□□□ 0.92
ATL1Q8WXF7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ATL1Q8WXF7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ATL1Q8WXF7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.77■□□□□ 0.92
ATL1Q8WXF7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.77■□□□□ 0.92
ATL1Q8WXF7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATL1Q8WXF7 AP006587.3-201ENST00000525742 1516 ntBASIC20.77■□□□□ 0.92
ATL1Q8WXF7 BX005040.4-201ENST00000637145 1518 ntBASIC20.77■□□□□ 0.92
ATL1Q8WXF7 AC244015.2-201ENST00000616358 1861 ntBASIC20.77■□□□□ 0.92
ATL1Q8WXF7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATL1Q8WXF7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATL1Q8WXF7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATL1Q8WXF7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.77■□□□□ 0.91
ATL1Q8WXF7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ATL1Q8WXF7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATL1Q8WXF7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATL1Q8WXF7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATL1Q8WXF7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.76■□□□□ 0.91
ATL1Q8WXF7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATL1Q8WXF7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ATL1Q8WXF7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATL1Q8WXF7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATL1Q8WXF7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATL1Q8WXF7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.76■□□□□ 0.91
ATL1Q8WXF7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.76■□□□□ 0.91
ATL1Q8WXF7 AL354811.1-201ENST00000610286 706 ntBASIC20.76■□□□□ 0.91
ATL1Q8WXF7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATL1Q8WXF7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATL1Q8WXF7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATL1Q8WXF7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ATL1Q8WXF7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATL1Q8WXF7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ATL1Q8WXF7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
ATL1Q8WXF7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATL1Q8WXF7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms