Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
COPS9Q8WXC6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
COPS9Q8WXC6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COPS9Q8WXC6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COPS9Q8WXC6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
COPS9Q8WXC6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
COPS9Q8WXC6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.43□□□□□ -0.1
COPS9Q8WXC6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
COPS9Q8WXC6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COPS9Q8WXC6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COPS9Q8WXC6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC14.43□□□□□ -0.1
COPS9Q8WXC6 LINC01960-201ENST00000563759 1884 ntBASIC14.43□□□□□ -0.1
COPS9Q8WXC6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COPS9Q8WXC6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.43□□□□□ -0.1
COPS9Q8WXC6 FEM1AP4-201ENST00000443167 1987 ntBASIC14.43□□□□□ -0.1
COPS9Q8WXC6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COPS9Q8WXC6 PKD1P5-201ENST00000532415 10291 ntBASIC14.43□□□□□ -0.1
COPS9Q8WXC6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
COPS9Q8WXC6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COPS9Q8WXC6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS9Q8WXC6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 AC026202.3-201ENST00000600805 1127 ntBASIC14.41□□□□□ -0.1
COPS9Q8WXC6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
COPS9Q8WXC6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COPS9Q8WXC6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COPS9Q8WXC6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS9Q8WXC6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS9Q8WXC6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
COPS9Q8WXC6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS9Q8WXC6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
COPS9Q8WXC6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC14.4□□□□□ -0.1
COPS9Q8WXC6 RAP2CP1-202ENST00000605179 643 ntBASIC14.4□□□□□ -0.1
COPS9Q8WXC6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
COPS9Q8WXC6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
COPS9Q8WXC6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS9Q8WXC6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS9Q8WXC6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COPS9Q8WXC6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
COPS9Q8WXC6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS9Q8WXC6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms