Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC168Q8NDH2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC168Q8NDH2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC168Q8NDH2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCDC168Q8NDH2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC168Q8NDH2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC168Q8NDH2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.02■□□□□ 0.47
CCDC168Q8NDH2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC168Q8NDH2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC168Q8NDH2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC168Q8NDH2 C1QBPP2-201ENST00000528754 825 ntBASIC18.01■□□□□ 0.47
CCDC168Q8NDH2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCDC168Q8NDH2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC168Q8NDH2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC168Q8NDH2 AC079630.1-202ENST00000618127 1840 ntBASIC18.01■□□□□ 0.47
CCDC168Q8NDH2 AC010980.2-201ENST00000587099 1412 ntBASIC18.01■□□□□ 0.47
CCDC168Q8NDH2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CCDC168Q8NDH2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC168Q8NDH2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC168Q8NDH2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.01■□□□□ 0.47
CCDC168Q8NDH2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC168Q8NDH2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC168Q8NDH2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC168Q8NDH2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC168Q8NDH2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18■□□□□ 0.47
CCDC168Q8NDH2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC168Q8NDH2 LINC00543-201ENST00000567234 1845 ntBASIC18■□□□□ 0.47
CCDC168Q8NDH2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC168Q8NDH2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18■□□□□ 0.47
CCDC168Q8NDH2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC168Q8NDH2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC168Q8NDH2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18■□□□□ 0.47
CCDC168Q8NDH2 TK2-213ENST00000563369 882 ntTSL 5 BASIC18■□□□□ 0.47
CCDC168Q8NDH2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18■□□□□ 0.47
CCDC168Q8NDH2 AC008403.3-201ENST00000598924 454 ntBASIC18■□□□□ 0.47
CCDC168Q8NDH2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC168Q8NDH2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC168Q8NDH2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CCDC168Q8NDH2 AL121749.1-202ENST00000609313 2153 ntBASIC18■□□□□ 0.47
CCDC168Q8NDH2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC168Q8NDH2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC168Q8NDH2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC168Q8NDH2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.99■□□□□ 0.47
CCDC168Q8NDH2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC168Q8NDH2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC168Q8NDH2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC168Q8NDH2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC168Q8NDH2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC168Q8NDH2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC168Q8NDH2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC168Q8NDH2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC168Q8NDH2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC168Q8NDH2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
CCDC168Q8NDH2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC168Q8NDH2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CCDC168Q8NDH2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC168Q8NDH2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC168Q8NDH2 FAM197Y4-202ENST00000622692 608 ntBASIC17.98■□□□□ 0.47
CCDC168Q8NDH2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC168Q8NDH2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC168Q8NDH2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC168Q8NDH2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC168Q8NDH2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC168Q8NDH2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC168Q8NDH2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC168Q8NDH2 AL353803.4-201ENST00000565882 1934 ntBASIC17.98■□□□□ 0.47
CCDC168Q8NDH2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC168Q8NDH2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
CCDC168Q8NDH2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC168Q8NDH2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC168Q8NDH2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CCDC168Q8NDH2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC168Q8NDH2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC168Q8NDH2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC168Q8NDH2 AC233263.1-201ENST00000578059 224 ntBASIC17.97■□□□□ 0.47
CCDC168Q8NDH2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.97■□□□□ 0.47
CCDC168Q8NDH2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC168Q8NDH2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC168Q8NDH2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CCDC168Q8NDH2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC168Q8NDH2 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.97■□□□□ 0.47
CCDC168Q8NDH2 TMPOP1-202ENST00000424642 1267 ntBASIC17.97■□□□□ 0.47
CCDC168Q8NDH2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC168Q8NDH2 AC133561.5-201ENST00000635547 218 ntBASIC17.97■□□□□ 0.47
CCDC168Q8NDH2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC168Q8NDH2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC168Q8NDH2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC168Q8NDH2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CCDC168Q8NDH2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC168Q8NDH2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC168Q8NDH2 ARMC10P1-201ENST00000313754 855 ntBASIC17.96■□□□□ 0.47
CCDC168Q8NDH2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC168Q8NDH2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC168Q8NDH2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC168Q8NDH2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC168Q8NDH2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC168Q8NDH2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC168Q8NDH2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC168Q8NDH2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC168Q8NDH2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms