Protein–RNA interactions for Protein: Q8N309

LRRC43, Leucine-rich repeat-containing protein 43, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC43Q8N309 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LRRC43Q8N309 AC013268.1-206ENST00000638368 961 ntBASIC23.03■■□□□ 1.28
LRRC43Q8N309 AC112229.1-201ENST00000639295 961 ntBASIC23.03■■□□□ 1.28
LRRC43Q8N309 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.03■■□□□ 1.28
LRRC43Q8N309 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.03■■□□□ 1.28
LRRC43Q8N309 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LRRC43Q8N309 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
LRRC43Q8N309 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRRC43Q8N309 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.02■■□□□ 1.28
LRRC43Q8N309 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.02■■□□□ 1.28
LRRC43Q8N309 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRRC43Q8N309 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRRC43Q8N309 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.02■■□□□ 1.28
LRRC43Q8N309 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRRC43Q8N309 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.02■■□□□ 1.28
LRRC43Q8N309 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LRRC43Q8N309 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.02■■□□□ 1.28
LRRC43Q8N309 KRT18P6-201ENST00000555540 1265 ntBASIC23.02■■□□□ 1.28
LRRC43Q8N309 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.02■■□□□ 1.28
LRRC43Q8N309 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.02■■□□□ 1.28
LRRC43Q8N309 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.02■■□□□ 1.28
LRRC43Q8N309 AC053503.5-201ENST00000601508 636 ntBASIC23.02■■□□□ 1.28
LRRC43Q8N309 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.02■■□□□ 1.28
LRRC43Q8N309 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRRC43Q8N309 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRRC43Q8N309 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
LRRC43Q8N309 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
LRRC43Q8N309 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.01■■□□□ 1.27
LRRC43Q8N309 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRRC43Q8N309 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRRC43Q8N309 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.01■■□□□ 1.27
LRRC43Q8N309 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LRRC43Q8N309 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.01■■□□□ 1.27
LRRC43Q8N309 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRRC43Q8N309 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRRC43Q8N309 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.01■■□□□ 1.27
LRRC43Q8N309 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LRRC43Q8N309 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRRC43Q8N309 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.01■■□□□ 1.27
LRRC43Q8N309 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.01■■□□□ 1.27
LRRC43Q8N309 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LRRC43Q8N309 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23■■□□□ 1.27
LRRC43Q8N309 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23■■□□□ 1.27
LRRC43Q8N309 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LRRC43Q8N309 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LRRC43Q8N309 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23■■□□□ 1.27
LRRC43Q8N309 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
LRRC43Q8N309 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23■■□□□ 1.27
LRRC43Q8N309 AC105036.2-201ENST00000569468 176 ntBASIC23■■□□□ 1.27
LRRC43Q8N309 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23■■□□□ 1.27
LRRC43Q8N309 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
LRRC43Q8N309 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
LRRC43Q8N309 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
LRRC43Q8N309 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
LRRC43Q8N309 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LRRC43Q8N309 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRRC43Q8N309 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.99■■□□□ 1.27
LRRC43Q8N309 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRRC43Q8N309 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.99■■□□□ 1.27
LRRC43Q8N309 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.99■■□□□ 1.27
LRRC43Q8N309 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRRC43Q8N309 AC069152.1-201ENST00000438030 544 ntBASIC22.99■■□□□ 1.27
LRRC43Q8N309 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.99■■□□□ 1.27
LRRC43Q8N309 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
LRRC43Q8N309 TMEM191A-211ENST00000637163 1067 ntBASIC22.99■■□□□ 1.27
LRRC43Q8N309 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRRC43Q8N309 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LRRC43Q8N309 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRRC43Q8N309 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.98■■□□□ 1.27
LRRC43Q8N309 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.98■■□□□ 1.27
LRRC43Q8N309 TERF1P5-201ENST00000477545 1207 ntBASIC22.98■■□□□ 1.27
LRRC43Q8N309 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.98■■□□□ 1.27
LRRC43Q8N309 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.98■■□□□ 1.27
LRRC43Q8N309 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LRRC43Q8N309 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.98■■□□□ 1.27
LRRC43Q8N309 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LRRC43Q8N309 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.97■■□□□ 1.27
LRRC43Q8N309 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.97■■□□□ 1.27
LRRC43Q8N309 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LRRC43Q8N309 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
LRRC43Q8N309 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.97■■□□□ 1.27
LRRC43Q8N309 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
LRRC43Q8N309 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
LRRC43Q8N309 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.97■■□□□ 1.27
LRRC43Q8N309 AC133041.1-202ENST00000642053 222 ntBASIC22.97■■□□□ 1.27
LRRC43Q8N309 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
LRRC43Q8N309 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRRC43Q8N309 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LRRC43Q8N309 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
LRRC43Q8N309 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
LRRC43Q8N309 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.96■■□□□ 1.27
LRRC43Q8N309 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRRC43Q8N309 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
LRRC43Q8N309 CYP2T1P-201ENST00000432607 1285 ntBASIC22.96■■□□□ 1.27
LRRC43Q8N309 TSPY20P-201ENST00000450910 630 ntBASIC22.96■■□□□ 1.27
LRRC43Q8N309 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LRRC43Q8N309 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRRC43Q8N309 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRRC43Q8N309 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.96■■□□□ 1.27
LRRC43Q8N309 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms