Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CCDC116Q8IYX3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC116Q8IYX3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC116Q8IYX3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC116Q8IYX3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC116Q8IYX3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC116Q8IYX3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC116Q8IYX3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC116Q8IYX3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
CCDC116Q8IYX3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.1■□□□□ 0.81
CCDC116Q8IYX3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC116Q8IYX3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC116Q8IYX3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC116Q8IYX3 AC007375.3-201ENST00000600936 2314 ntBASIC20.1■□□□□ 0.81
CCDC116Q8IYX3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC116Q8IYX3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC116Q8IYX3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC116Q8IYX3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC116Q8IYX3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC116Q8IYX3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC116Q8IYX3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC116Q8IYX3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CCDC116Q8IYX3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC116Q8IYX3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC116Q8IYX3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC116Q8IYX3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CCDC116Q8IYX3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC116Q8IYX3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC116Q8IYX3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC116Q8IYX3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.09■□□□□ 0.81
CCDC116Q8IYX3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC116Q8IYX3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC116Q8IYX3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC116Q8IYX3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
CCDC116Q8IYX3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CCDC116Q8IYX3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC116Q8IYX3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC116Q8IYX3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC116Q8IYX3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC116Q8IYX3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC116Q8IYX3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC116Q8IYX3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC116Q8IYX3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC116Q8IYX3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC116Q8IYX3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC116Q8IYX3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC116Q8IYX3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC116Q8IYX3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC116Q8IYX3 AC244015.2-201ENST00000616358 1861 ntBASIC20.07■□□□□ 0.8
CCDC116Q8IYX3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CCDC116Q8IYX3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC116Q8IYX3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC116Q8IYX3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC116Q8IYX3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC116Q8IYX3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC116Q8IYX3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CCDC116Q8IYX3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC116Q8IYX3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC116Q8IYX3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CCDC116Q8IYX3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC116Q8IYX3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC116Q8IYX3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC116Q8IYX3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC116Q8IYX3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC116Q8IYX3 AC105265.2-201ENST00000467189 838 ntBASIC20.06■□□□□ 0.8
CCDC116Q8IYX3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC116Q8IYX3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC116Q8IYX3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC116Q8IYX3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC116Q8IYX3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC116Q8IYX3 AP006587.3-201ENST00000525742 1516 ntBASIC20.06■□□□□ 0.8
CCDC116Q8IYX3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC116Q8IYX3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC116Q8IYX3 AC003102.1-202ENST00000563394 1796 ntBASIC20.06■□□□□ 0.8
CCDC116Q8IYX3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 AC104564.3-201ENST00000582367 638 ntBASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 BX005040.4-201ENST00000637145 1518 ntBASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC116Q8IYX3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 AC009237.3-201ENST00000393279 1427 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms