Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE9Q8IYJ1 RASA4CP-201ENST00000424092 1398 ntBASIC21.1■□□□□ 0.97
CPNE9Q8IYJ1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 AL136967.2-201ENST00000623968 743 ntBASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CPNE9Q8IYJ1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE9Q8IYJ1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE9Q8IYJ1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CPNE9Q8IYJ1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE9Q8IYJ1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE9Q8IYJ1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE9Q8IYJ1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.08■□□□□ 0.97
CPNE9Q8IYJ1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CPNE9Q8IYJ1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CPNE9Q8IYJ1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE9Q8IYJ1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE9Q8IYJ1 AC091305.1-201ENST00000479476 895 ntBASIC21.08■□□□□ 0.97
CPNE9Q8IYJ1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE9Q8IYJ1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.97
CPNE9Q8IYJ1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CPNE9Q8IYJ1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE9Q8IYJ1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
CPNE9Q8IYJ1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CPNE9Q8IYJ1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.08■□□□□ 0.96
CPNE9Q8IYJ1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CPNE9Q8IYJ1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CPNE9Q8IYJ1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE9Q8IYJ1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE9Q8IYJ1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.07■□□□□ 0.96
CPNE9Q8IYJ1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CPNE9Q8IYJ1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE9Q8IYJ1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.07■□□□□ 0.96
CPNE9Q8IYJ1 SUDS3P1-201ENST00000505831 966 ntBASIC21.07■□□□□ 0.96
CPNE9Q8IYJ1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.07■□□□□ 0.96
CPNE9Q8IYJ1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE9Q8IYJ1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.07■□□□□ 0.96
CPNE9Q8IYJ1 AC244015.2-201ENST00000616358 1861 ntBASIC21.07■□□□□ 0.96
CPNE9Q8IYJ1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE9Q8IYJ1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.07■□□□□ 0.96
CPNE9Q8IYJ1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE9Q8IYJ1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE9Q8IYJ1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE9Q8IYJ1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE9Q8IYJ1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.06■□□□□ 0.96
CPNE9Q8IYJ1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE9Q8IYJ1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE9Q8IYJ1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE9Q8IYJ1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.06■□□□□ 0.96
CPNE9Q8IYJ1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE9Q8IYJ1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
CPNE9Q8IYJ1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE9Q8IYJ1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
CPNE9Q8IYJ1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CPNE9Q8IYJ1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE9Q8IYJ1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE9Q8IYJ1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.05■□□□□ 0.96
CPNE9Q8IYJ1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.05■□□□□ 0.96
CPNE9Q8IYJ1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE9Q8IYJ1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE9Q8IYJ1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE9Q8IYJ1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE9Q8IYJ1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.05■□□□□ 0.96
CPNE9Q8IYJ1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.05■□□□□ 0.96
CPNE9Q8IYJ1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.05■□□□□ 0.96
CPNE9Q8IYJ1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE9Q8IYJ1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE9Q8IYJ1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE9Q8IYJ1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CPNE9Q8IYJ1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.04■□□□□ 0.96
CPNE9Q8IYJ1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.04■□□□□ 0.96
CPNE9Q8IYJ1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.04■□□□□ 0.96
CPNE9Q8IYJ1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.04■□□□□ 0.96
CPNE9Q8IYJ1 AC105233.4-201ENST00000642045 216 ntBASIC21.04■□□□□ 0.96
CPNE9Q8IYJ1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE9Q8IYJ1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE9Q8IYJ1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE9Q8IYJ1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE9Q8IYJ1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE9Q8IYJ1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.04■□□□□ 0.96
CPNE9Q8IYJ1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.04■□□□□ 0.96
CPNE9Q8IYJ1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE9Q8IYJ1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms