Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
NHLRC1Q6VVB1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NHLRC1Q6VVB1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NHLRC1Q6VVB1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NHLRC1Q6VVB1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
NHLRC1Q6VVB1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NHLRC1Q6VVB1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NHLRC1Q6VVB1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NHLRC1Q6VVB1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
NHLRC1Q6VVB1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.13■□□□□ 0.65
NHLRC1Q6VVB1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.13■□□□□ 0.65
NHLRC1Q6VVB1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
NHLRC1Q6VVB1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.13■□□□□ 0.65
NHLRC1Q6VVB1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NHLRC1Q6VVB1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
NHLRC1Q6VVB1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.13■□□□□ 0.65
NHLRC1Q6VVB1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NHLRC1Q6VVB1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NHLRC1Q6VVB1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.12■□□□□ 0.65
NHLRC1Q6VVB1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NHLRC1Q6VVB1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.12■□□□□ 0.65
NHLRC1Q6VVB1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.12■□□□□ 0.65
NHLRC1Q6VVB1 AP004607.7-201ENST00000527152 1677 ntBASIC19.12■□□□□ 0.65
NHLRC1Q6VVB1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NHLRC1Q6VVB1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.12■□□□□ 0.65
NHLRC1Q6VVB1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NHLRC1Q6VVB1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NHLRC1Q6VVB1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.12■□□□□ 0.65
NHLRC1Q6VVB1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.11■□□□□ 0.65
NHLRC1Q6VVB1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.1■□□□□ 0.65
NHLRC1Q6VVB1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NHLRC1Q6VVB1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NHLRC1Q6VVB1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NHLRC1Q6VVB1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NHLRC1Q6VVB1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NHLRC1Q6VVB1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NHLRC1Q6VVB1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NHLRC1Q6VVB1 AC142381.2-201ENST00000566120 298 ntBASIC19.1■□□□□ 0.65
NHLRC1Q6VVB1 AL034346.1-201ENST00000568244 1277 ntBASIC19.1■□□□□ 0.65
NHLRC1Q6VVB1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NHLRC1Q6VVB1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NHLRC1Q6VVB1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NHLRC1Q6VVB1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NHLRC1Q6VVB1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NHLRC1Q6VVB1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NHLRC1Q6VVB1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
NHLRC1Q6VVB1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NHLRC1Q6VVB1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NHLRC1Q6VVB1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NHLRC1Q6VVB1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NHLRC1Q6VVB1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NHLRC1Q6VVB1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NHLRC1Q6VVB1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NHLRC1Q6VVB1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.09■□□□□ 0.65
NHLRC1Q6VVB1 AC105233.4-201ENST00000642045 216 ntBASIC19.09■□□□□ 0.65
NHLRC1Q6VVB1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.09■□□□□ 0.65
NHLRC1Q6VVB1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NHLRC1Q6VVB1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.09■□□□□ 0.65
NHLRC1Q6VVB1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.09■□□□□ 0.65
NHLRC1Q6VVB1 FBXW4P1-201ENST00000426721 2239 ntBASIC19.09■□□□□ 0.65
NHLRC1Q6VVB1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
NHLRC1Q6VVB1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
NHLRC1Q6VVB1 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.08■□□□□ 0.65
NHLRC1Q6VVB1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.08■□□□□ 0.65
NHLRC1Q6VVB1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
NHLRC1Q6VVB1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
NHLRC1Q6VVB1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NHLRC1Q6VVB1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NHLRC1Q6VVB1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NHLRC1Q6VVB1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NHLRC1Q6VVB1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.08■□□□□ 0.64
NHLRC1Q6VVB1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NHLRC1Q6VVB1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.08■□□□□ 0.64
NHLRC1Q6VVB1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.08■□□□□ 0.64
NHLRC1Q6VVB1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.08■□□□□ 0.64
NHLRC1Q6VVB1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NHLRC1Q6VVB1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
NHLRC1Q6VVB1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.08■□□□□ 0.64
NHLRC1Q6VVB1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms