Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM40Q6P9F5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
TRIM40Q6P9F5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM40Q6P9F5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM40Q6P9F5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM40Q6P9F5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM40Q6P9F5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM40Q6P9F5 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TRIM40Q6P9F5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM40Q6P9F5 AC012414.1-201ENST00000556676 535 ntBASIC20.46■□□□□ 0.87
TRIM40Q6P9F5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM40Q6P9F5 AL354811.1-201ENST00000610286 706 ntBASIC20.46■□□□□ 0.87
TRIM40Q6P9F5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM40Q6P9F5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM40Q6P9F5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM40Q6P9F5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM40Q6P9F5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM40Q6P9F5 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM40Q6P9F5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM40Q6P9F5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TRIM40Q6P9F5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM40Q6P9F5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.45■□□□□ 0.87
TRIM40Q6P9F5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM40Q6P9F5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM40Q6P9F5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM40Q6P9F5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM40Q6P9F5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.45■□□□□ 0.86
TRIM40Q6P9F5 AL358852.1-201ENST00000623174 1268 ntBASIC20.45■□□□□ 0.86
TRIM40Q6P9F5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM40Q6P9F5 AC007375.3-201ENST00000600936 2314 ntBASIC20.45■□□□□ 0.86
TRIM40Q6P9F5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM40Q6P9F5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM40Q6P9F5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM40Q6P9F5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM40Q6P9F5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM40Q6P9F5 FAM99A-202ENST00000538190 1989 ntBASIC20.45■□□□□ 0.86
TRIM40Q6P9F5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM40Q6P9F5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM40Q6P9F5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM40Q6P9F5 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM40Q6P9F5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM40Q6P9F5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM40Q6P9F5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM40Q6P9F5 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM40Q6P9F5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM40Q6P9F5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.43■□□□□ 0.86
TRIM40Q6P9F5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM40Q6P9F5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM40Q6P9F5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM40Q6P9F5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM40Q6P9F5 BX005040.4-201ENST00000637145 1518 ntBASIC20.43■□□□□ 0.86
TRIM40Q6P9F5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TRIM40Q6P9F5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM40Q6P9F5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TRIM40Q6P9F5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
TRIM40Q6P9F5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM40Q6P9F5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM40Q6P9F5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM40Q6P9F5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM40Q6P9F5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.42■□□□□ 0.86
TRIM40Q6P9F5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM40Q6P9F5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM40Q6P9F5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.42■□□□□ 0.86
TRIM40Q6P9F5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TRIM40Q6P9F5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
TRIM40Q6P9F5 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM40Q6P9F5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM40Q6P9F5 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TRIM40Q6P9F5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TRIM40Q6P9F5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
TRIM40Q6P9F5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM40Q6P9F5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.41■□□□□ 0.86
TRIM40Q6P9F5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM40Q6P9F5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.41■□□□□ 0.86
TRIM40Q6P9F5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.41■□□□□ 0.86
TRIM40Q6P9F5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM40Q6P9F5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms