Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SWSAP1Q6NVH7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.85■■□□□ 1.41
SWSAP1Q6NVH7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SWSAP1Q6NVH7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SWSAP1Q6NVH7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SWSAP1Q6NVH7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.85■■□□□ 1.41
SWSAP1Q6NVH7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
SWSAP1Q6NVH7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SWSAP1Q6NVH7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SWSAP1Q6NVH7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SWSAP1Q6NVH7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SWSAP1Q6NVH7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.84■■□□□ 1.41
SWSAP1Q6NVH7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SWSAP1Q6NVH7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.84■■□□□ 1.41
SWSAP1Q6NVH7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.84■■□□□ 1.41
SWSAP1Q6NVH7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SWSAP1Q6NVH7 KRT18P11-201ENST00000435214 1283 ntBASIC23.84■■□□□ 1.41
SWSAP1Q6NVH7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SWSAP1Q6NVH7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.84■■□□□ 1.41
SWSAP1Q6NVH7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.84■■□□□ 1.41
SWSAP1Q6NVH7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
SWSAP1Q6NVH7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SWSAP1Q6NVH7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.84■■□□□ 1.41
SWSAP1Q6NVH7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
SWSAP1Q6NVH7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SWSAP1Q6NVH7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.83■■□□□ 1.41
SWSAP1Q6NVH7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.83■■□□□ 1.41
SWSAP1Q6NVH7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.83■■□□□ 1.41
SWSAP1Q6NVH7 EEF1DP3-203ENST00000566025 782 ntBASIC23.83■■□□□ 1.41
SWSAP1Q6NVH7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.83■■□□□ 1.41
SWSAP1Q6NVH7 AC138907.5-202ENST00000569484 235 ntBASIC23.83■■□□□ 1.41
SWSAP1Q6NVH7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SWSAP1Q6NVH7 AC011767.1-201ENST00000617410 1153 ntBASIC23.83■■□□□ 1.41
SWSAP1Q6NVH7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.83■■□□□ 1.41
SWSAP1Q6NVH7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SWSAP1Q6NVH7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SWSAP1Q6NVH7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SWSAP1Q6NVH7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.83■■□□□ 1.4
SWSAP1Q6NVH7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SWSAP1Q6NVH7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SWSAP1Q6NVH7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SWSAP1Q6NVH7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SWSAP1Q6NVH7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
SWSAP1Q6NVH7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.82■■□□□ 1.4
SWSAP1Q6NVH7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.82■■□□□ 1.4
SWSAP1Q6NVH7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SWSAP1Q6NVH7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SWSAP1Q6NVH7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SWSAP1Q6NVH7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SWSAP1Q6NVH7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SWSAP1Q6NVH7 CDCA4P2-201ENST00000441182 718 ntBASIC23.82■■□□□ 1.4
SWSAP1Q6NVH7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.82■■□□□ 1.4
SWSAP1Q6NVH7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.82■■□□□ 1.4
SWSAP1Q6NVH7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.82■■□□□ 1.4
SWSAP1Q6NVH7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.82■■□□□ 1.4
SWSAP1Q6NVH7 AC073111.5-205ENST00000641717 521 ntBASIC23.82■■□□□ 1.4
SWSAP1Q6NVH7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.82■■□□□ 1.4
SWSAP1Q6NVH7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.82■■□□□ 1.4
SWSAP1Q6NVH7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SWSAP1Q6NVH7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SWSAP1Q6NVH7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.81■■□□□ 1.4
SWSAP1Q6NVH7 AC053503.5-201ENST00000601508 636 ntBASIC23.81■■□□□ 1.4
SWSAP1Q6NVH7 UBE2DNL-204ENST00000602536 740 ntBASIC23.81■■□□□ 1.4
SWSAP1Q6NVH7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SWSAP1Q6NVH7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.81■■□□□ 1.4
SWSAP1Q6NVH7 AC068473.5-201ENST00000616428 2072 ntBASIC23.8■■□□□ 1.4
SWSAP1Q6NVH7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.8■■□□□ 1.4
SWSAP1Q6NVH7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.8■■□□□ 1.4
SWSAP1Q6NVH7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SWSAP1Q6NVH7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SWSAP1Q6NVH7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.8■■□□□ 1.4
SWSAP1Q6NVH7 AC010141.2-201ENST00000452426 721 ntBASIC23.8■■□□□ 1.4
SWSAP1Q6NVH7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.8■■□□□ 1.4
SWSAP1Q6NVH7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.8■■□□□ 1.4
SWSAP1Q6NVH7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.8■■□□□ 1.4
SWSAP1Q6NVH7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
SWSAP1Q6NVH7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SWSAP1Q6NVH7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SWSAP1Q6NVH7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SWSAP1Q6NVH7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SWSAP1Q6NVH7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SWSAP1Q6NVH7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SWSAP1Q6NVH7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SWSAP1Q6NVH7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SWSAP1Q6NVH7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SWSAP1Q6NVH7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.79■■□□□ 1.4
SWSAP1Q6NVH7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.79■■□□□ 1.4
SWSAP1Q6NVH7 RAP2CP1-201ENST00000605103 478 ntBASIC23.79■■□□□ 1.4
SWSAP1Q6NVH7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SWSAP1Q6NVH7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SWSAP1Q6NVH7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SWSAP1Q6NVH7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SWSAP1Q6NVH7 AC026471.6-201ENST00000622954 1905 ntBASIC23.78■■□□□ 1.4
SWSAP1Q6NVH7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SWSAP1Q6NVH7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SWSAP1Q6NVH7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SWSAP1Q6NVH7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.78■■□□□ 1.4
SWSAP1Q6NVH7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SWSAP1Q6NVH7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.78■■□□□ 1.4
SWSAP1Q6NVH7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms