Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LSM6P62312 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
LSM6P62312 AP006587.3-201ENST00000525742 1516 ntBASIC18.76■□□□□ 0.59
LSM6P62312 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.76■□□□□ 0.59
LSM6P62312 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.76■□□□□ 0.59
LSM6P62312 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.76■□□□□ 0.59
LSM6P62312 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LSM6P62312 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LSM6P62312 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LSM6P62312 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.76■□□□□ 0.59
LSM6P62312 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LSM6P62312 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LSM6P62312 AC009237.3-201ENST00000393279 1427 ntBASIC18.75■□□□□ 0.59
LSM6P62312 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.75■□□□□ 0.59
LSM6P62312 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.75■□□□□ 0.59
LSM6P62312 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LSM6P62312 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LSM6P62312 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LSM6P62312 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.75■□□□□ 0.59
LSM6P62312 MIR572-201ENST00000384983 95 ntBASIC18.75■□□□□ 0.59
LSM6P62312 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.75■□□□□ 0.59
LSM6P62312 SUDS3P1-201ENST00000505831 966 ntBASIC18.75■□□□□ 0.59
LSM6P62312 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LSM6P62312 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.75■□□□□ 0.59
LSM6P62312 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LSM6P62312 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.75■□□□□ 0.59
LSM6P62312 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LSM6P62312 AC105233.4-201ENST00000642045 216 ntBASIC18.75■□□□□ 0.59
LSM6P62312 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LSM6P62312 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LSM6P62312 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LSM6P62312 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LSM6P62312 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.75■□□□□ 0.59
LSM6P62312 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LSM6P62312 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LSM6P62312 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LSM6P62312 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LSM6P62312 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LSM6P62312 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LSM6P62312 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LSM6P62312 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LSM6P62312 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LSM6P62312 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LSM6P62312 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSM6P62312 AC003102.1-202ENST00000563394 1796 ntBASIC18.73■□□□□ 0.59
LSM6P62312 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LSM6P62312 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.73■□□□□ 0.59
LSM6P62312 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSM6P62312 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.73■□□□□ 0.59
LSM6P62312 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSM6P62312 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.73■□□□□ 0.59
LSM6P62312 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.73■□□□□ 0.59
LSM6P62312 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LSM6P62312 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.73■□□□□ 0.59
LSM6P62312 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSM6P62312 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSM6P62312 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSM6P62312 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.73■□□□□ 0.59
LSM6P62312 AC007375.3-201ENST00000600936 2314 ntBASIC18.73■□□□□ 0.59
LSM6P62312 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.73■□□□□ 0.59
LSM6P62312 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.73■□□□□ 0.59
LSM6P62312 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.72■□□□□ 0.59
LSM6P62312 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.72■□□□□ 0.59
LSM6P62312 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM6P62312 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM6P62312 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM6P62312 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.72■□□□□ 0.59
LSM6P62312 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM6P62312 Z98882.1-201ENST00000622160 2253 ntBASIC18.72■□□□□ 0.59
LSM6P62312 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LSM6P62312 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
LSM6P62312 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.72■□□□□ 0.59
LSM6P62312 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.72■□□□□ 0.59
LSM6P62312 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.72■□□□□ 0.59
LSM6P62312 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM6P62312 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM6P62312 AC026310.3-201ENST00000625186 2373 ntBASIC18.71■□□□□ 0.59
LSM6P62312 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM6P62312 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM6P62312 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LSM6P62312 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM6P62312 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM6P62312 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM6P62312 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.71■□□□□ 0.59
LSM6P62312 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LSM6P62312 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.71■□□□□ 0.59
LSM6P62312 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.71■□□□□ 0.59
LSM6P62312 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LSM6P62312 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.7■□□□□ 0.58
LSM6P62312 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM6P62312 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
LSM6P62312 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.7■□□□□ 0.58
LSM6P62312 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.7■□□□□ 0.58
LSM6P62312 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM6P62312 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.7■□□□□ 0.58
LSM6P62312 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.7■□□□□ 0.58
LSM6P62312 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM6P62312 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.7■□□□□ 0.58
LSM6P62312 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LSM6P62312 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms