Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EPHA3P29320 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EPHA3P29320 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EPHA3P29320 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
EPHA3P29320 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EPHA3P29320 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.73■□□□□ 0.91
EPHA3P29320 pRNA.6-201ENST00000610482 90 ntBASIC20.73■□□□□ 0.91
EPHA3P29320 pRNA.5-201ENST00000612139 90 ntBASIC20.73■□□□□ 0.91
EPHA3P29320 pRNA.11-201ENST00000618423 90 ntBASIC20.73■□□□□ 0.91
EPHA3P29320 pRNA.13-201ENST00000619112 90 ntBASIC20.73■□□□□ 0.91
EPHA3P29320 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.73■□□□□ 0.91
EPHA3P29320 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.73■□□□□ 0.91
EPHA3P29320 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EPHA3P29320 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EPHA3P29320 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EPHA3P29320 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.72■□□□□ 0.91
EPHA3P29320 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA3P29320 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA3P29320 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA3P29320 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.72■□□□□ 0.91
EPHA3P29320 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA3P29320 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA3P29320 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA3P29320 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA3P29320 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA3P29320 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA3P29320 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA3P29320 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
EPHA3P29320 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA3P29320 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA3P29320 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.72■□□□□ 0.91
EPHA3P29320 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.72■□□□□ 0.91
EPHA3P29320 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.72■□□□□ 0.91
EPHA3P29320 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.72■□□□□ 0.91
EPHA3P29320 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHA3P29320 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
EPHA3P29320 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHA3P29320 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHA3P29320 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHA3P29320 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
EPHA3P29320 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.71■□□□□ 0.91
EPHA3P29320 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
EPHA3P29320 LINC01006-201ENST00000333319 2292 ntBASIC20.71■□□□□ 0.91
EPHA3P29320 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.71■□□□□ 0.91
EPHA3P29320 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
EPHA3P29320 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
EPHA3P29320 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.71■□□□□ 0.91
EPHA3P29320 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.71■□□□□ 0.91
EPHA3P29320 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHA3P29320 AC092667.1-201ENST00000434301 2586 ntBASIC20.71■□□□□ 0.91
EPHA3P29320 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHA3P29320 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EPHA3P29320 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHA3P29320 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHA3P29320 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
EPHA3P29320 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
EPHA3P29320 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EPHA3P29320 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EPHA3P29320 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EPHA3P29320 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EPHA3P29320 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EPHA3P29320 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.7■□□□□ 0.9
EPHA3P29320 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
EPHA3P29320 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EPHA3P29320 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.7■□□□□ 0.9
EPHA3P29320 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EPHA3P29320 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EPHA3P29320 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHA3P29320 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.69■□□□□ 0.9
EPHA3P29320 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.69■□□□□ 0.9
EPHA3P29320 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EPHA3P29320 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHA3P29320 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHA3P29320 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
EPHA3P29320 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHA3P29320 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
EPHA3P29320 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHA3P29320 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHA3P29320 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHA3P29320 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.69■□□□□ 0.9
EPHA3P29320 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.68■□□□□ 0.9
EPHA3P29320 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHA3P29320 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
EPHA3P29320 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.68■□□□□ 0.9
EPHA3P29320 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHA3P29320 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
EPHA3P29320 MIR6724-1-201ENST00000616420 92 ntBASIC20.68■□□□□ 0.9
EPHA3P29320 MIR6724-2-201ENST00000616483 92 ntBASIC20.68■□□□□ 0.9
EPHA3P29320 MIR6724-4-201ENST00000617390 92 ntBASIC20.68■□□□□ 0.9
EPHA3P29320 MIR6724-3-201ENST00000622482 92 ntBASIC20.68■□□□□ 0.9
EPHA3P29320 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHA3P29320 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHA3P29320 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHA3P29320 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHA3P29320 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.67■□□□□ 0.9
EPHA3P29320 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHA3P29320 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHA3P29320 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.67■□□□□ 0.9
EPHA3P29320 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.67■□□□□ 0.9
EPHA3P29320 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms