Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HTR1EP28566 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.38■□□□□ 0.85
HTR1EP28566 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HTR1EP28566 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.38■□□□□ 0.85
HTR1EP28566 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HTR1EP28566 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HTR1EP28566 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HTR1EP28566 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HTR1EP28566 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HTR1EP28566 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.38■□□□□ 0.85
HTR1EP28566 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HTR1EP28566 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HTR1EP28566 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HTR1EP28566 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HTR1EP28566 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HTR1EP28566 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.37■□□□□ 0.85
HTR1EP28566 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HTR1EP28566 RASA4CP-201ENST00000424092 1398 ntBASIC20.37■□□□□ 0.85
HTR1EP28566 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HTR1EP28566 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HTR1EP28566 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HTR1EP28566 AF106564.1-201ENST00000607058 2553 ntBASIC20.37■□□□□ 0.85
HTR1EP28566 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HTR1EP28566 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.37■□□□□ 0.85
HTR1EP28566 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.37■□□□□ 0.85
HTR1EP28566 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HTR1EP28566 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
HTR1EP28566 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HTR1EP28566 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HTR1EP28566 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HTR1EP28566 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
HTR1EP28566 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.37■□□□□ 0.85
HTR1EP28566 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HTR1EP28566 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HTR1EP28566 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HTR1EP28566 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.36■□□□□ 0.85
HTR1EP28566 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.36■□□□□ 0.85
HTR1EP28566 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HTR1EP28566 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.36■□□□□ 0.85
HTR1EP28566 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.36■□□□□ 0.85
HTR1EP28566 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HTR1EP28566 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HTR1EP28566 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.36■□□□□ 0.85
HTR1EP28566 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HTR1EP28566 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HTR1EP28566 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1EP28566 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.35■□□□□ 0.85
HTR1EP28566 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1EP28566 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HTR1EP28566 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1EP28566 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1EP28566 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1EP28566 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1EP28566 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
HTR1EP28566 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1EP28566 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1EP28566 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1EP28566 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1EP28566 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1EP28566 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1EP28566 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1EP28566 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1EP28566 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1EP28566 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HTR1EP28566 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.34■□□□□ 0.85
HTR1EP28566 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.34■□□□□ 0.85
HTR1EP28566 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HTR1EP28566 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HTR1EP28566 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
HTR1EP28566 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HTR1EP28566 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTR1EP28566 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HTR1EP28566 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.34■□□□□ 0.85
HTR1EP28566 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HTR1EP28566 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.34■□□□□ 0.85
HTR1EP28566 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.34■□□□□ 0.85
HTR1EP28566 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HTR1EP28566 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTR1EP28566 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
HTR1EP28566 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTR1EP28566 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTR1EP28566 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
HTR1EP28566 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HTR1EP28566 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
HTR1EP28566 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.33■□□□□ 0.85
HTR1EP28566 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
HTR1EP28566 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTR1EP28566 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTR1EP28566 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTR1EP28566 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
HTR1EP28566 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTR1EP28566 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTR1EP28566 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.33■□□□□ 0.85
HTR1EP28566 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HTR1EP28566 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.33■□□□□ 0.85
HTR1EP28566 AC027682.1-201ENST00000562846 899 ntBASIC20.33■□□□□ 0.85
HTR1EP28566 AC009102.2-201ENST00000606772 1639 ntBASIC20.33■□□□□ 0.84
HTR1EP28566 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HTR1EP28566 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
HTR1EP28566 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms