Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.28■□□□□ 0.84
MMP11P24347 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
MMP11P24347 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP11P24347 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
MMP11P24347 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MMP11P24347 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
MMP11P24347 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.27■□□□□ 0.84
MMP11P24347 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP11P24347 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MMP11P24347 LINC01960-201ENST00000563759 1884 ntBASIC20.27■□□□□ 0.84
MMP11P24347 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MMP11P24347 AP004607.4-201ENST00000530158 1459 ntBASIC20.27■□□□□ 0.84
MMP11P24347 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP11P24347 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
MMP11P24347 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.27■□□□□ 0.84
MMP11P24347 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.27■□□□□ 0.84
MMP11P24347 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.27■□□□□ 0.84
MMP11P24347 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.27■□□□□ 0.84
MMP11P24347 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
MMP11P24347 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
MMP11P24347 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
MMP11P24347 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
MMP11P24347 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
MMP11P24347 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
MMP11P24347 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.27■□□□□ 0.83
MMP11P24347 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP11P24347 AC080038.3-201ENST00000623346 1952 ntBASIC20.26■□□□□ 0.83
MMP11P24347 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.26■□□□□ 0.83
MMP11P24347 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
MMP11P24347 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP11P24347 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP11P24347 AC092053.2-201ENST00000640557 1818 ntBASIC20.26■□□□□ 0.83
MMP11P24347 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP11P24347 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.26■□□□□ 0.83
MMP11P24347 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.26■□□□□ 0.83
MMP11P24347 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.26■□□□□ 0.83
MMP11P24347 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.26■□□□□ 0.83
MMP11P24347 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MMP11P24347 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.26■□□□□ 0.83
MMP11P24347 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.26■□□□□ 0.83
MMP11P24347 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP11P24347 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MMP11P24347 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.26■□□□□ 0.83
MMP11P24347 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP11P24347 AC004854.2-201ENST00000608450 1441 ntBASIC20.26■□□□□ 0.83
MMP11P24347 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
MMP11P24347 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
MMP11P24347 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
MMP11P24347 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP11P24347 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MMP11P24347 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MMP11P24347 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.25■□□□□ 0.83
MMP11P24347 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP11P24347 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MMP11P24347 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MMP11P24347 AC009237.3-201ENST00000393279 1427 ntBASIC20.25■□□□□ 0.83
MMP11P24347 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP11P24347 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP11P24347 AC007375.3-201ENST00000600936 2314 ntBASIC20.25■□□□□ 0.83
MMP11P24347 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP11P24347 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP11P24347 AC087742.1-201ENST00000575880 1738 ntBASIC20.24■□□□□ 0.83
MMP11P24347 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP11P24347 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MMP11P24347 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MMP11P24347 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP11P24347 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP11P24347 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MMP11P24347 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP11P24347 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP11P24347 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MMP11P24347 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.24■□□□□ 0.83
MMP11P24347 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
MMP11P24347 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
MMP11P24347 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.24■□□□□ 0.83
MMP11P24347 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MMP11P24347 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP11P24347 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MMP11P24347 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP11P24347 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
MMP11P24347 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP11P24347 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP11P24347 KRT19P1-201ENST00000405746 1186 ntBASIC20.23■□□□□ 0.83
MMP11P24347 AC006015.1-201ENST00000429970 570 ntBASIC20.23■□□□□ 0.83
MMP11P24347 AC079140.4-201ENST00000507448 529 ntBASIC20.23■□□□□ 0.83
MMP11P24347 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.23■□□□□ 0.83
MMP11P24347 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.23■□□□□ 0.83
MMP11P24347 AC137761.2-201ENST00000561729 223 ntBASIC20.23■□□□□ 0.83
MMP11P24347 AC145350.3-201ENST00000569033 163 ntBASIC20.23■□□□□ 0.83
MMP11P24347 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
MMP11P24347 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
MMP11P24347 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
MMP11P24347 C11orf96-202ENST00000528572 1834 ntBASIC20.23■□□□□ 0.83
MMP11P24347 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP11P24347 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP11P24347 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP11P24347 AC016769.1-201ENST00000409132 1010 ntBASIC20.22■□□□□ 0.83
MMP11P24347 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.22■□□□□ 0.83
MMP11P24347 AC079089.2-201ENST00000531211 1277 ntBASIC20.22■□□□□ 0.83
MMP11P24347 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms