Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.81■□□□□ 0.92
CDH3P22223 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH3P22223 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH3P22223 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CDH3P22223 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CDH3P22223 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
CDH3P22223 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH3P22223 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.8■□□□□ 0.92
CDH3P22223 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDH3P22223 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH3P22223 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.8■□□□□ 0.92
CDH3P22223 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CDH3P22223 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH3P22223 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH3P22223 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH3P22223 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH3P22223 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH3P22223 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH3P22223 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH3P22223 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CDH3P22223 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH3P22223 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.79■□□□□ 0.92
CDH3P22223 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH3P22223 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CDH3P22223 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH3P22223 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.79■□□□□ 0.92
CDH3P22223 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CDH3P22223 NTF6G-201ENST00000591094 616 ntBASIC20.79■□□□□ 0.92
CDH3P22223 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH3P22223 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH3P22223 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH3P22223 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH3P22223 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CDH3P22223 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH3P22223 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH3P22223 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH3P22223 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH3P22223 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH3P22223 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH3P22223 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH3P22223 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH3P22223 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH3P22223 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CDH3P22223 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH3P22223 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH3P22223 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH3P22223 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CDH3P22223 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH3P22223 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH3P22223 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.78■□□□□ 0.92
CDH3P22223 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH3P22223 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
CDH3P22223 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH3P22223 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH3P22223 OR7E47P-201ENST00000546390 1422 ntBASIC20.78■□□□□ 0.92
CDH3P22223 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH3P22223 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH3P22223 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.78■□□□□ 0.92
CDH3P22223 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH3P22223 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH3P22223 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.77■□□□□ 0.92
CDH3P22223 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH3P22223 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.77■□□□□ 0.92
CDH3P22223 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDH3P22223 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH3P22223 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDH3P22223 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.77■□□□□ 0.92
CDH3P22223 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDH3P22223 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH3P22223 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.77■□□□□ 0.92
CDH3P22223 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.77■□□□□ 0.92
CDH3P22223 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CDH3P22223 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDH3P22223 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH3P22223 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.77■□□□□ 0.92
CDH3P22223 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDH3P22223 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH3P22223 AC087742.1-201ENST00000575880 1738 ntBASIC20.76■□□□□ 0.91
CDH3P22223 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH3P22223 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH3P22223 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH3P22223 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.76■□□□□ 0.91
CDH3P22223 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CDH3P22223 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.76■□□□□ 0.91
CDH3P22223 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH3P22223 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CDH3P22223 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH3P22223 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH3P22223 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CDH3P22223 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDH3P22223 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDH3P22223 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDH3P22223 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CDH3P22223 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.75■□□□□ 0.91
CDH3P22223 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.75■□□□□ 0.91
CDH3P22223 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CDH3P22223 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH3P22223 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.75■□□□□ 0.91
CDH3P22223 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.75■□□□□ 0.91
CDH3P22223 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms