Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 YME1YPR024W 2244 nt5.78□□□□□ -1.48
TY1A-PR2P0CX60 TSL1YML100W 3297 nt5.78□□□□□ -1.48
TY1A-PR2P0CX60 PSA1YDL055C 1086 nt5.78□□□□□ -1.48
TY1A-PR2P0CX60 HIS1YER055C 894 nt5.78□□□□□ -1.48
TY1A-PR2P0CX60 RPS24BYIL069C 408 nt5.78□□□□□ -1.48
TY1A-PR2P0CX60 YLR269CYLR269C 351 nt5.78□□□□□ -1.48
TY1A-PR2P0CX60 MED11YMR112C 396 nt5.78□□□□□ -1.48
TY1A-PR2P0CX60 YPL108WYPL108W 507 nt5.78□□□□□ -1.48
TY1A-PR2P0CX60 VPS69YPR087W 321 nt5.78□□□□□ -1.48
TY1A-PR2P0CX60 SEC2YNL272C 2280 nt5.78□□□□□ -1.48
TY1A-PR2P0CX60 FUS2YMR232W 2034 nt5.77□□□□□ -1.49
TY1A-PR2P0CX60 NDT80YHR124W 1884 nt5.77□□□□□ -1.49
TY1A-PR2P0CX60 MUB1YMR100W 1863 nt5.77□□□□□ -1.49
TY1A-PR2P0CX60 HXT15YDL245C 1704 nt5.77□□□□□ -1.49
TY1A-PR2P0CX60 MSM1YGR171C 1728 nt5.77□□□□□ -1.49
TY1A-PR2P0CX60 HXT16YJR158W 1704 nt5.77□□□□□ -1.49
TY1A-PR2P0CX60 YDL094CYDL094C 510 nt5.77□□□□□ -1.49
TY1A-PR2P0CX60 SKP1YDR328C 585 nt5.77□□□□□ -1.49
TY1A-PR2P0CX60 YOR200WYOR200W 399 nt5.77□□□□□ -1.49
TY1A-PR2P0CX60 DSC3YOR223W 879 nt5.77□□□□□ -1.49
TY1A-PR2P0CX60 YPR096CYPR096C 303 nt5.77□□□□□ -1.49
TY1A-PR2P0CX60 PSP2YML017W 1782 nt5.77□□□□□ -1.49
TY1A-PR2P0CX60 ALG11YNL048W 1647 nt5.77□□□□□ -1.49
TY1A-PR2P0CX60 RIM21YNL294C 1602 nt5.77□□□□□ -1.49
TY1A-PR2P0CX60 RIM4YHL024W 2142 nt5.77□□□□□ -1.49
TY1A-PR2P0CX60 FAT3YKL187C 2253 nt5.76□□□□□ -1.49
TY1A-PR2P0CX60 YPS7YDR349C 1791 nt5.76□□□□□ -1.49
TY1A-PR2P0CX60 MPP10YJR002W 1782 nt5.76□□□□□ -1.49
TY1A-PR2P0CX60 NTF2YER009W 378 nt5.76□□□□□ -1.49
TY1A-PR2P0CX60 YFL013W-AYFL013W-A 804 nt5.76□□□□□ -1.49
TY1A-PR2P0CX60 PAU5YFL020C 369 nt5.76□□□□□ -1.49
TY1A-PR2P0CX60 MTM1YGR257C 1101 nt5.76□□□□□ -1.49
TY1A-PR2P0CX60 PHS1YJL097W 654 nt5.76□□□□□ -1.49
TY1A-PR2P0CX60 PIR1YKL164C 1026 nt5.76□□□□□ -1.49
TY1A-PR2P0CX60 YKR041WYKR041W 753 nt5.76□□□□□ -1.49
TY1A-PR2P0CX60 VPS63YLR261C 327 nt5.76□□□□□ -1.49
TY1A-PR2P0CX60 SPG4YMR107W 348 nt5.76□□□□□ -1.49
TY1A-PR2P0CX60 TIM18YOR297C 579 nt5.76□□□□□ -1.49
TY1A-PR2P0CX60 MRPL51YPR100W 423 nt5.76□□□□□ -1.49
TY1A-PR2P0CX60 PDB1YBR221C 1101 nt5.76□□□□□ -1.49
TY1A-PR2P0CX60 YEH2YLR020C 1617 nt5.76□□□□□ -1.49
TY1A-PR2P0CX60 SNF12YNR023W 1701 nt5.76□□□□□ -1.49
TY1A-PR2P0CX60 TKL1YPR074C 2043 nt5.75□□□□□ -1.49
TY1A-PR2P0CX60 VNX1YNL321W 2727 nt5.75□□□□□ -1.49
TY1A-PR2P0CX60 RTR2YDR066C 591 nt5.75□□□□□ -1.49
TY1A-PR2P0CX60 SDH6YDR379C-A 240 nt5.75□□□□□ -1.49
TY1A-PR2P0CX60 YKL068W-AYKL068W-A 237 nt5.75□□□□□ -1.49
TY1A-PR2P0CX60 SHE2YKL130C 741 nt5.75□□□□□ -1.49
TY1A-PR2P0CX60 CCW12YLR110C 402 nt5.75□□□□□ -1.49
TY1A-PR2P0CX60 YMR316C-AYMR316C-A 312 nt5.75□□□□□ -1.49
TY1A-PR2P0CX60 BIL1YOR304C-A 231 nt5.75□□□□□ -1.49
TY1A-PR2P0CX60 RPL43AYPR043W 279 nt5.75□□□□□ -1.49
TY1A-PR2P0CX60 NCS2YNL119W 1482 nt5.75□□□□□ -1.49
TY1A-PR2P0CX60 ICP55YER078C 1536 nt5.74□□□□□ -1.49
TY1A-PR2P0CX60 ARP2YDL029W 1176 nt5.74□□□□□ -1.49
TY1A-PR2P0CX60 YDR090CYDR090C 933 nt5.74□□□□□ -1.49
TY1A-PR2P0CX60 ATP5YDR298C 639 nt5.74□□□□□ -1.49
TY1A-PR2P0CX60 YDR524C-AYDR524C-A 120 nt5.74□□□□□ -1.49
TY1A-PR2P0CX60 YGR053CYGR053C 852 nt5.74□□□□□ -1.49
TY1A-PR2P0CX60 RGI2YIL057C 495 nt5.74□□□□□ -1.49
TY1A-PR2P0CX60 GCN3YKR026C 918 nt5.74□□□□□ -1.49
TY1A-PR2P0CX60 RPP0YLR340W 939 nt5.74□□□□□ -1.49
TY1A-PR2P0CX60 CUE4YML101C 354 nt5.74□□□□□ -1.49
TY1A-PR2P0CX60 RIM9YMR063W 720 nt5.74□□□□□ -1.49
TY1A-PR2P0CX60 YAR1YPL239W 603 nt5.74□□□□□ -1.49
TY1A-PR2P0CX60 PEX29YDR479C 1665 nt5.74□□□□□ -1.49
TY1A-PR2P0CX60 HXT5YHR096C 1779 nt5.74□□□□□ -1.49
TY1A-PR2P0CX60 PMA1YGL008C 2757 nt5.74□□□□□ -1.49
TY1A-PR2P0CX60 YOR365CYOR365C 2112 nt5.74□□□□□ -1.49
TY1A-PR2P0CX60 ILV1YER086W 1731 nt5.74□□□□□ -1.49
TY1A-PR2P0CX60 RPN6YDL097C 1305 nt5.74□□□□□ -1.49
TY1A-PR2P0CX60 YHR045WYHR045W 1683 nt5.73□□□□□ -1.49
TY1A-PR2P0CX60 CDC48YDL126C 2508 nt5.73□□□□□ -1.49
TY1A-PR2P0CX60 KEL1YHR158C 3495 nt5.73□□□□□ -1.49
TY1A-PR2P0CX60 TEF1YPR080W 1377 nt5.73□□□□□ -1.49
TY1A-PR2P0CX60 TEF2YBR118W 1377 nt5.73□□□□□ -1.49
TY1A-PR2P0CX60 YDL068WYDL068W 330 nt5.73□□□□□ -1.49
TY1A-PR2P0CX60 SUF5tG(CCC)O 72 nt5.73□□□□□ -1.49
TY1A-PR2P0CX60 HAC1YFL031W 717 nt5.73□□□□□ -1.49
TY1A-PR2P0CX60 YGL193CYGL193C 312 nt5.73□□□□□ -1.49
TY1A-PR2P0CX60 FCF2YLR051C 654 nt5.73□□□□□ -1.49
TY1A-PR2P0CX60 YAR075WYAR075W 474 nt5.73□□□□□ -1.49
TY1A-PR2P0CX60 PGA3YML125C 939 nt5.73□□□□□ -1.49
TY1A-PR2P0CX60 MKK2YPL140C 1521 nt5.73□□□□□ -1.49
TY1A-PR2P0CX60 FMP25YLR077W 1752 nt5.72□□□□□ -1.49
TY1A-PR2P0CX60 MIH1YMR036C 1665 nt5.72□□□□□ -1.49
TY1A-PR2P0CX60 RVB1YDR190C 1392 nt5.72□□□□□ -1.49
TY1A-PR2P0CX60 TGA1tA(UGC)A 73 nt5.72□□□□□ -1.49
TY1A-PR2P0CX60 tA(UGC)EtA(UGC)E 73 nt5.72□□□□□ -1.49
TY1A-PR2P0CX60 tA(UGC)GtA(UGC)G 73 nt5.72□□□□□ -1.49
TY1A-PR2P0CX60 tA(UGC)LtA(UGC)L 73 nt5.72□□□□□ -1.49
TY1A-PR2P0CX60 tA(UGC)OtA(UGC)O 73 nt5.72□□□□□ -1.49
TY1A-PR2P0CX60 QCR2YPR191W 1107 nt5.72□□□□□ -1.49
TY1A-PR2P0CX60 YMR221CYMR221C 1515 nt5.72□□□□□ -1.49
TY1A-PR2P0CX60 YGR117CYGR117C 1431 nt5.72□□□□□ -1.49
TY1A-PR2P0CX60 PUF2YPR042C 3228 nt5.72□□□□□ -1.49
TY1A-PR2P0CX60 AGA1YNR044W 2178 nt5.72□□□□□ -1.49
TY1A-PR2P0CX60 HOM3YER052C 1584 nt5.72□□□□□ -1.49
TY1A-PR2P0CX60 SEC27YGL137W 2670 nt5.71□□□□□ -1.49
TY1A-PR2P0CX60 RPS11AYDR025W 471 nt5.71□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 19 ms