Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 MSB2YGR014W 3921 nt2.5□□□□□ -2.01
RPL40BP0CH09 YDR098C-BYDR098C-B 5268 nt2.5□□□□□ -2.01
RPL40BP0CH09 YDR210C-DYDR210C-D 5268 nt2.5□□□□□ -2.01
RPL40BP0CH09 YDR316W-BYDR316W-B 5268 nt2.5□□□□□ -2.01
RPL40BP0CH09 YDR365W-BYDR365W-B 5268 nt2.5□□□□□ -2.01
RPL40BP0CH09 YER138CYER138C 5268 nt2.5□□□□□ -2.01
RPL40BP0CH09 YER160CYER160C 5268 nt2.5□□□□□ -2.01
RPL40BP0CH09 YGR038C-BYGR038C-B 5268 nt2.5□□□□□ -2.01
RPL40BP0CH09 YGR161C-DYGR161C-D 5268 nt2.5□□□□□ -2.01
RPL40BP0CH09 YJR027WYJR027W 5268 nt2.5□□□□□ -2.01
RPL40BP0CH09 YLR157C-BYLR157C-B 5268 nt2.5□□□□□ -2.01
RPL40BP0CH09 YML039WYML039W 5268 nt2.5□□□□□ -2.01
RPL40BP0CH09 YML045WYML045W 5268 nt2.5□□□□□ -2.01
RPL40BP0CH09 YMR050CYMR050C 5268 nt2.5□□□□□ -2.01
RPL40BP0CH09 YOL103W-BYOL103W-B 5268 nt2.5□□□□□ -2.01
RPL40BP0CH09 YBR012W-BYBR012W-B 5271 nt2.5□□□□□ -2.01
RPL40BP0CH09 YOR142W-BYOR142W-B 5268 nt2.5□□□□□ -2.01
RPL40BP0CH09 YPL257W-BYPL257W-B 5268 nt2.5□□□□□ -2.01
RPL40BP0CH09 YPR158W-BYPR158W-B 5271 nt2.5□□□□□ -2.01
RPL40BP0CH09 YDR442WYDR442W 393 nt2.5□□□□□ -2.01
RPL40BP0CH09 YHP1YDR451C 1062 nt2.5□□□□□ -2.01
RPL40BP0CH09 MOB2YFL034C-B 864 nt2.5□□□□□ -2.01
RPL40BP0CH09 PSY1YKL076C 384 nt2.5□□□□□ -2.01
RPL40BP0CH09 YOL035CYOL035C 303 nt2.5□□□□□ -2.01
RPL40BP0CH09 YPR150WYPR150W 522 nt2.5□□□□□ -2.01
RPL40BP0CH09 AST2YER101C 1293 nt2.49□□□□□ -2.01
RPL40BP0CH09 YGL193CYGL193C 312 nt2.49□□□□□ -2.01
RPL40BP0CH09 YHR086W-AYHR086W-A 162 nt2.49□□□□□ -2.01
RPL40BP0CH09 YHR213WYHR213W 597 nt2.49□□□□□ -2.01
RPL40BP0CH09 YKR033CYKR033C 426 nt2.49□□□□□ -2.01
RPL40BP0CH09 YAR062WYAR062W 597 nt2.49□□□□□ -2.01
RPL40BP0CH09 END3YNL084C 1050 nt2.49□□□□□ -2.01
RPL40BP0CH09 RPL33AYPL143W 324 nt2.49□□□□□ -2.01
RPL40BP0CH09 BSD2YBR290W 966 nt2.49□□□□□ -2.01
RPL40BP0CH09 CYR1YJL005W 6081 nt2.49□□□□□ -2.01
RPL40BP0CH09 SER3YER081W 1410 nt2.49□□□□□ -2.01
RPL40BP0CH09 SCP160YJL080C 3669 nt2.48□□□□□ -2.01
RPL40BP0CH09 YJL132WYJL132W 2253 nt2.48□□□□□ -2.01
RPL40BP0CH09 MIH1YMR036C 1665 nt2.48□□□□□ -2.01
RPL40BP0CH09 NCS2YNL119W 1482 nt2.48□□□□□ -2.01
RPL40BP0CH09 RPS22AYJL190C 393 nt2.48□□□□□ -2.01
RPL40BP0CH09 CPR7YJR032W 1182 nt2.48□□□□□ -2.01
RPL40BP0CH09 DDP1YOR163W 567 nt2.48□□□□□ -2.01
RPL40BP0CH09 KIN82YCR091W 2163 nt2.48□□□□□ -2.01
RPL40BP0CH09 MAK21YDR060W 3078 nt2.48□□□□□ -2.01
RPL40BP0CH09 STP2YHR006W 1626 nt2.48□□□□□ -2.01
RPL40BP0CH09 IOC4YMR044W 1428 nt2.48□□□□□ -2.01
RPL40BP0CH09 CPA2YJR109C 3357 nt2.48□□□□□ -2.01
RPL40BP0CH09 BEM4YPL161C 1902 nt2.48□□□□□ -2.01
RPL40BP0CH09 SAP1YER047C 2694 nt2.47□□□□□ -2.01
RPL40BP0CH09 NPR3YHL023C 3441 nt2.47□□□□□ -2.01
RPL40BP0CH09 YDR061WYDR061W 1620 nt2.47□□□□□ -2.01
RPL40BP0CH09 INO2YDR123C 915 nt2.47□□□□□ -2.01
RPL40BP0CH09 RCE1YMR274C 948 nt2.47□□□□□ -2.01
RPL40BP0CH09 MIC27YNL100W 705 nt2.47□□□□□ -2.01
RPL40BP0CH09 IST1YNL265C 897 nt2.47□□□□□ -2.01
RPL40BP0CH09 SET2YJL168C 2202 nt2.47□□□□□ -2.01
RPL40BP0CH09 PHO91YNR013C 2685 nt2.47□□□□□ -2.01
RPL40BP0CH09 PTP3YER075C 2787 nt2.47□□□□□ -2.01
RPL40BP0CH09 NSA1YGL111W 1392 nt2.47□□□□□ -2.01
RPL40BP0CH09 RKM3YBR030W 1659 nt2.47□□□□□ -2.01
RPL40BP0CH09 PRP8YHR165C 7242 nt2.47□□□□□ -2.01
RPL40BP0CH09 UTP25YIL091C 2166 nt2.46□□□□□ -2.02
RPL40BP0CH09 MSH2YOL090W 2895 nt2.46□□□□□ -2.02
RPL40BP0CH09 RPS18AYDR450W 441 nt2.46□□□□□ -2.02
RPL40BP0CH09 YIL174WYIL174W 228 nt2.46□□□□□ -2.02
RPL40BP0CH09 YJL222W-AYJL222W-A 228 nt2.46□□□□□ -2.02
RPL40BP0CH09 SWP1YMR149W 861 nt2.46□□□□□ -2.02
RPL40BP0CH09 RPB8YOR224C 441 nt2.46□□□□□ -2.02
RPL40BP0CH09 YPR077CYPR077C 372 nt2.46□□□□□ -2.02
RPL40BP0CH09 MIF2YKL089W 1650 nt2.46□□□□□ -2.02
RPL40BP0CH09 HDA2YDR295C 2025 nt2.46□□□□□ -2.02
RPL40BP0CH09 NDT80YHR124W 1884 nt2.45□□□□□ -2.02
RPL40BP0CH09 IOC3YFR013W 2364 nt2.45□□□□□ -2.02
RPL40BP0CH09 PGS1YCL004W 1566 nt2.45□□□□□ -2.02
RPL40BP0CH09 GYP7YDL234C 2241 nt2.45□□□□□ -2.02
RPL40BP0CH09 TIF4631YGR162W 2859 nt2.45□□□□□ -2.02
RPL40BP0CH09 SRB8YCR081W 4284 nt2.45□□□□□ -2.02
RPL40BP0CH09 SET4YJL105W 1683 nt2.45□□□□□ -2.02
RPL40BP0CH09 AAD16YFL057C 459 nt2.45□□□□□ -2.02
RPL40BP0CH09 PSR1YLL010C 1284 nt2.45□□□□□ -2.02
RPL40BP0CH09 KAR4YCL055W 1008 nt2.45□□□□□ -2.02
RPL40BP0CH09 GPB1YOR371C 2694 nt2.45□□□□□ -2.02
RPL40BP0CH09 APL5YPL195W 2799 nt2.45□□□□□ -2.02
RPL40BP0CH09 SET1YHR119W 3243 nt2.44□□□□□ -2.02
RPL40BP0CH09 YDR089WYDR089W 2610 nt2.44□□□□□ -2.02
RPL40BP0CH09 MAK11YKL021C 1407 nt2.44□□□□□ -2.02
RPL40BP0CH09 SUL1YBR294W 2580 nt2.44□□□□□ -2.02
RPL40BP0CH09 YDL162CYDL162C 357 nt2.44□□□□□ -2.02
RPL40BP0CH09 YDL242WYDL242W 354 nt2.44□□□□□ -2.02
RPL40BP0CH09 NNF1YJR112W 606 nt2.44□□□□□ -2.02
RPL40BP0CH09 YLR347W-AYLR347W-A 141 nt2.44□□□□□ -2.02
RPL40BP0CH09 OST6YML019W 999 nt2.44□□□□□ -2.02
RPL40BP0CH09 YNR071CYNR071C 1029 nt2.44□□□□□ -2.02
RPL40BP0CH09 YOR238WYOR238W 912 nt2.44□□□□□ -2.02
RPL40BP0CH09 SEC66YBR171W 621 nt2.44□□□□□ -2.02
RPL40BP0CH09 SKN7YHR206W 1869 nt2.43□□□□□ -2.02
RPL40BP0CH09 AYT1YLL063C 1425 nt2.43□□□□□ -2.02
RPL40BP0CH09 SPS2YDR522C 1509 nt2.43□□□□□ -2.02
RPL40BP0CH09 TPD3YAL016W 1908 nt2.43□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 24.1 ms