Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
CHGBP05060 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.8■■□□□ 1.72
CHGBP05060 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC25.8■■□□□ 1.72
CHGBP05060 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CHGBP05060 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC25.8■■□□□ 1.72
CHGBP05060 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
CHGBP05060 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.8■■□□□ 1.72
CHGBP05060 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CHGBP05060 IKBKGP1-201ENST00000612193 1073 ntBASIC25.8■■□□□ 1.72
CHGBP05060 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHGBP05060 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
CHGBP05060 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.8■■□□□ 1.72
CHGBP05060 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHGBP05060 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
CHGBP05060 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHGBP05060 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHGBP05060 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHGBP05060 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC25.79■■□□□ 1.72
CHGBP05060 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC25.79■■□□□ 1.72
CHGBP05060 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.79■■□□□ 1.72
CHGBP05060 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.79■■□□□ 1.72
CHGBP05060 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.79■■□□□ 1.72
CHGBP05060 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHGBP05060 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.79■■□□□ 1.72
CHGBP05060 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHGBP05060 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.79■■□□□ 1.72
CHGBP05060 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CHGBP05060 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC25.78■■□□□ 1.72
CHGBP05060 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.78■■□□□ 1.72
CHGBP05060 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.78■■□□□ 1.72
CHGBP05060 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC25.78■■□□□ 1.72
CHGBP05060 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.78■■□□□ 1.72
CHGBP05060 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.78■■□□□ 1.72
CHGBP05060 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
CHGBP05060 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC25.78■■□□□ 1.72
CHGBP05060 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC25.78■■□□□ 1.72
CHGBP05060 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC25.78■■□□□ 1.72
CHGBP05060 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CHGBP05060 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
CHGBP05060 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
CHGBP05060 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CHGBP05060 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHGBP05060 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
CHGBP05060 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CHGBP05060 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHGBP05060 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CHGBP05060 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHGBP05060 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CHGBP05060 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC25.77■■□□□ 1.72
CHGBP05060 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CHGBP05060 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.77■■□□□ 1.72
CHGBP05060 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHGBP05060 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CHGBP05060 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CHGBP05060 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHGBP05060 COX20-201ENST00000366528 568 ntTSL 2 BASIC25.76■■□□□ 1.71
CHGBP05060 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.76■■□□□ 1.71
CHGBP05060 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHGBP05060 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.76■■□□□ 1.71
CHGBP05060 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.76■■□□□ 1.71
CHGBP05060 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CHGBP05060 AC092437.1-201ENST00000624794 1048 ntBASIC25.76■■□□□ 1.71
CHGBP05060 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CHGBP05060 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.76■■□□□ 1.71
CHGBP05060 C11orf96-202ENST00000528572 1834 ntBASIC25.76■■□□□ 1.71
CHGBP05060 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHGBP05060 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CHGBP05060 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
CHGBP05060 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
CHGBP05060 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHGBP05060 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
CHGBP05060 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHGBP05060 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CHGBP05060 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CHGBP05060 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
CHGBP05060 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC25.75■■□□□ 1.71
CHGBP05060 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.75■■□□□ 1.71
CHGBP05060 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHGBP05060 AC079140.4-201ENST00000507448 529 ntBASIC25.75■■□□□ 1.71
CHGBP05060 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC25.75■■□□□ 1.71
CHGBP05060 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CHGBP05060 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHGBP05060 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC25.75■■□□□ 1.71
CHGBP05060 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CHGBP05060 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC25.74■■□□□ 1.71
CHGBP05060 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC25.74■■□□□ 1.71
CHGBP05060 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.74■■□□□ 1.71
CHGBP05060 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
CHGBP05060 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC25.73■■□□□ 1.71
CHGBP05060 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CHGBP05060 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.73■■□□□ 1.71
CHGBP05060 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25.73■■□□□ 1.71
CHGBP05060 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHGBP05060 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC25.73■■□□□ 1.71
CHGBP05060 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.73■■□□□ 1.71
CHGBP05060 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.73■■□□□ 1.71
CHGBP05060 AC022517.1-201ENST00000592429 346 ntBASIC25.73■■□□□ 1.71
CHGBP05060 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHGBP05060 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHGBP05060 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms