Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NDUFS3O75489 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.27■■□□□ 1
NDUFS3O75489 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.27■■□□□ 1
NDUFS3O75489 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.27■■□□□ 1
NDUFS3O75489 AC142381.2-201ENST00000566120 298 ntBASIC21.27■■□□□ 1
NDUFS3O75489 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
NDUFS3O75489 AC105233.4-201ENST00000642045 216 ntBASIC21.27■■□□□ 1
NDUFS3O75489 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NDUFS3O75489 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
NDUFS3O75489 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NDUFS3O75489 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NDUFS3O75489 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NDUFS3O75489 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
NDUFS3O75489 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFS3O75489 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NDUFS3O75489 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFS3O75489 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFS3O75489 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFS3O75489 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFS3O75489 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFS3O75489 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NDUFS3O75489 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.26■□□□□ 0.99
NDUFS3O75489 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFS3O75489 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFS3O75489 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.26■□□□□ 0.99
NDUFS3O75489 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFS3O75489 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFS3O75489 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFS3O75489 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFS3O75489 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
NDUFS3O75489 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.25■□□□□ 0.99
NDUFS3O75489 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NDUFS3O75489 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.25■□□□□ 0.99
NDUFS3O75489 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NDUFS3O75489 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.25■□□□□ 0.99
NDUFS3O75489 AC104564.3-201ENST00000582367 638 ntBASIC21.25■□□□□ 0.99
NDUFS3O75489 AC244015.2-201ENST00000616358 1861 ntBASIC21.25■□□□□ 0.99
NDUFS3O75489 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NDUFS3O75489 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.25■□□□□ 0.99
NDUFS3O75489 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.25■□□□□ 0.99
NDUFS3O75489 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
NDUFS3O75489 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NDUFS3O75489 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NDUFS3O75489 CLDN5-201ENST00000403084 2357 ntBASIC21.24■□□□□ 0.99
NDUFS3O75489 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NDUFS3O75489 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDUFS3O75489 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDUFS3O75489 MIR572-201ENST00000384983 95 ntBASIC21.24■□□□□ 0.99
NDUFS3O75489 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.24■□□□□ 0.99
NDUFS3O75489 AC005837.3-201ENST00000612163 286 ntBASIC21.24■□□□□ 0.99
NDUFS3O75489 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
NDUFS3O75489 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDUFS3O75489 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.24■□□□□ 0.99
NDUFS3O75489 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDUFS3O75489 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NDUFS3O75489 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.23■□□□□ 0.99
NDUFS3O75489 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NDUFS3O75489 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NDUFS3O75489 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.23■□□□□ 0.99
NDUFS3O75489 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.23■□□□□ 0.99
NDUFS3O75489 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.23■□□□□ 0.99
NDUFS3O75489 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.23■□□□□ 0.99
NDUFS3O75489 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.23■□□□□ 0.99
NDUFS3O75489 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.23■□□□□ 0.99
NDUFS3O75489 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NDUFS3O75489 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.23■□□□□ 0.99
NDUFS3O75489 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NDUFS3O75489 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NDUFS3O75489 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NDUFS3O75489 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.23■□□□□ 0.99
NDUFS3O75489 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
NDUFS3O75489 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NDUFS3O75489 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NDUFS3O75489 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NDUFS3O75489 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.22■□□□□ 0.99
NDUFS3O75489 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.22■□□□□ 0.99
NDUFS3O75489 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.22■□□□□ 0.99
NDUFS3O75489 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NDUFS3O75489 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
NDUFS3O75489 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
NDUFS3O75489 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NDUFS3O75489 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NDUFS3O75489 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NDUFS3O75489 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NDUFS3O75489 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NDUFS3O75489 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NDUFS3O75489 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.21■□□□□ 0.99
NDUFS3O75489 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NDUFS3O75489 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NDUFS3O75489 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
NDUFS3O75489 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.21■□□□□ 0.99
NDUFS3O75489 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.21■□□□□ 0.99
NDUFS3O75489 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.21■□□□□ 0.99
NDUFS3O75489 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NDUFS3O75489 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NDUFS3O75489 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NDUFS3O75489 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.21■□□□□ 0.99
NDUFS3O75489 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NDUFS3O75489 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NDUFS3O75489 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.2■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms