Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.66■□□□□ 0.74
CPSF4LA6NMK7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPSF4LA6NMK7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPSF4LA6NMK7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CPSF4LA6NMK7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPSF4LA6NMK7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.65■□□□□ 0.74
CPSF4LA6NMK7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.65■□□□□ 0.74
CPSF4LA6NMK7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CPSF4LA6NMK7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CPSF4LA6NMK7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPSF4LA6NMK7 SLC47A1P1-202ENST00000449666 945 ntBASIC19.65■□□□□ 0.74
CPSF4LA6NMK7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.65■□□□□ 0.74
CPSF4LA6NMK7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
CPSF4LA6NMK7 AC136469.2-201ENST00000623944 1028 ntBASIC19.65■□□□□ 0.74
CPSF4LA6NMK7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPSF4LA6NMK7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPSF4LA6NMK7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPSF4LA6NMK7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CPSF4LA6NMK7 AF106564.1-201ENST00000607058 2553 ntBASIC19.65■□□□□ 0.74
CPSF4LA6NMK7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CPSF4LA6NMK7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CPSF4LA6NMK7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CPSF4LA6NMK7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.64■□□□□ 0.74
CPSF4LA6NMK7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 AC104564.3-201ENST00000582367 638 ntBASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 AC011298.3-201ENST00000615796 283 ntBASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.64■□□□□ 0.73
CPSF4LA6NMK7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPSF4LA6NMK7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPSF4LA6NMK7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPSF4LA6NMK7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPSF4LA6NMK7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPSF4LA6NMK7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CPSF4LA6NMK7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.63■□□□□ 0.73
CPSF4LA6NMK7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPSF4LA6NMK7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.63■□□□□ 0.73
CPSF4LA6NMK7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.63■□□□□ 0.73
CPSF4LA6NMK7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPSF4LA6NMK7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPSF4LA6NMK7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.62■□□□□ 0.73
CPSF4LA6NMK7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.62■□□□□ 0.73
CPSF4LA6NMK7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.62■□□□□ 0.73
CPSF4LA6NMK7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPSF4LA6NMK7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPSF4LA6NMK7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPSF4LA6NMK7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.62■□□□□ 0.73
CPSF4LA6NMK7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.62■□□□□ 0.73
CPSF4LA6NMK7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CPSF4LA6NMK7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.62■□□□□ 0.73
CPSF4LA6NMK7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPSF4LA6NMK7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPSF4LA6NMK7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPSF4LA6NMK7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPSF4LA6NMK7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.62■□□□□ 0.73
CPSF4LA6NMK7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.61■□□□□ 0.73
CPSF4LA6NMK7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.61■□□□□ 0.73
CPSF4LA6NMK7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPSF4LA6NMK7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPSF4LA6NMK7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPSF4LA6NMK7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CPSF4LA6NMK7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.61■□□□□ 0.73
CPSF4LA6NMK7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPSF4LA6NMK7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CPSF4LA6NMK7 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.61■□□□□ 0.73
CPSF4LA6NMK7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CPSF4LA6NMK7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.61■□□□□ 0.73
CPSF4LA6NMK7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.61■□□□□ 0.73
CPSF4LA6NMK7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
CPSF4LA6NMK7 FEM1AP4-201ENST00000443167 1987 ntBASIC19.61■□□□□ 0.73
CPSF4LA6NMK7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF4LA6NMK7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF4LA6NMK7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF4LA6NMK7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF4LA6NMK7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF4LA6NMK7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF4LA6NMK7 AP004607.7-201ENST00000527152 1677 ntBASIC19.6■□□□□ 0.73
CPSF4LA6NMK7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CPSF4LA6NMK7 AL136116.3-201ENST00000402907 1138 ntBASIC19.6■□□□□ 0.73
CPSF4LA6NMK7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF4LA6NMK7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.6■□□□□ 0.73
CPSF4LA6NMK7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.6■□□□□ 0.73
CPSF4LA6NMK7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF4LA6NMK7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.6■□□□□ 0.73
CPSF4LA6NMK7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms