Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM23A6NLE4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM23A6NLE4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.78■■□□□ 1.08
SMIM23A6NLE4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.78■■□□□ 1.08
SMIM23A6NLE4 AL121603.2-201ENST00000557373 2117 ntBASIC21.78■■□□□ 1.08
SMIM23A6NLE4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SMIM23A6NLE4 AC137630.3-201ENST00000607245 391 ntBASIC21.78■■□□□ 1.08
SMIM23A6NLE4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM23A6NLE4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.78■■□□□ 1.08
SMIM23A6NLE4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM23A6NLE4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SMIM23A6NLE4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMIM23A6NLE4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
SMIM23A6NLE4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.77■■□□□ 1.08
SMIM23A6NLE4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SMIM23A6NLE4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMIM23A6NLE4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
SMIM23A6NLE4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SMIM23A6NLE4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.77■■□□□ 1.08
SMIM23A6NLE4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.76■■□□□ 1.07
SMIM23A6NLE4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.75■■□□□ 1.07
SMIM23A6NLE4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMIM23A6NLE4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMIM23A6NLE4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.75■■□□□ 1.07
SMIM23A6NLE4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMIM23A6NLE4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMIM23A6NLE4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.75■■□□□ 1.07
SMIM23A6NLE4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMIM23A6NLE4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.75■■□□□ 1.07
SMIM23A6NLE4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMIM23A6NLE4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SMIM23A6NLE4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMIM23A6NLE4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMIM23A6NLE4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMIM23A6NLE4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMIM23A6NLE4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMIM23A6NLE4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.75■■□□□ 1.07
SMIM23A6NLE4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SMIM23A6NLE4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMIM23A6NLE4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMIM23A6NLE4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.74■■□□□ 1.07
SMIM23A6NLE4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.74■■□□□ 1.07
SMIM23A6NLE4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMIM23A6NLE4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
SMIM23A6NLE4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.74■■□□□ 1.07
SMIM23A6NLE4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.74■■□□□ 1.07
SMIM23A6NLE4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
SMIM23A6NLE4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SMIM23A6NLE4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMIM23A6NLE4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMIM23A6NLE4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMIM23A6NLE4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMIM23A6NLE4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.74■■□□□ 1.07
SMIM23A6NLE4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMIM23A6NLE4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMIM23A6NLE4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMIM23A6NLE4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMIM23A6NLE4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SMIM23A6NLE4 YBX1P4-201ENST00000392794 808 ntBASIC21.73■■□□□ 1.07
SMIM23A6NLE4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
SMIM23A6NLE4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMIM23A6NLE4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMIM23A6NLE4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMIM23A6NLE4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.72■■□□□ 1.07
SMIM23A6NLE4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
SMIM23A6NLE4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.72■■□□□ 1.07
SMIM23A6NLE4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.72■■□□□ 1.07
SMIM23A6NLE4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.72■■□□□ 1.07
SMIM23A6NLE4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.72■■□□□ 1.07
SMIM23A6NLE4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMIM23A6NLE4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMIM23A6NLE4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMIM23A6NLE4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.71■■□□□ 1.07
SMIM23A6NLE4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SMIM23A6NLE4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMIM23A6NLE4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.71■■□□□ 1.07
SMIM23A6NLE4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMIM23A6NLE4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms