Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC25.24■■□□□ 1.63
TMEM88BA6NKF7 AC060766.5-201ENST00000590539 871 ntBASIC25.24■■□□□ 1.63
TMEM88BA6NKF7 AL591742.1-201ENST00000604433 565 ntBASIC25.24■■□□□ 1.63
TMEM88BA6NKF7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
TMEM88BA6NKF7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TMEM88BA6NKF7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TMEM88BA6NKF7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TMEM88BA6NKF7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC25.23■■□□□ 1.63
TMEM88BA6NKF7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC25.23■■□□□ 1.63
TMEM88BA6NKF7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.23■■□□□ 1.63
TMEM88BA6NKF7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TMEM88BA6NKF7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC25.23■■□□□ 1.63
TMEM88BA6NKF7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC25.23■■□□□ 1.63
TMEM88BA6NKF7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC25.23■■□□□ 1.63
TMEM88BA6NKF7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC25.23■■□□□ 1.63
TMEM88BA6NKF7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC25.23■■□□□ 1.63
TMEM88BA6NKF7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC25.23■■□□□ 1.63
TMEM88BA6NKF7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
TMEM88BA6NKF7 DUSP8P3-201ENST00000399571 1760 ntBASIC25.23■■□□□ 1.63
TMEM88BA6NKF7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
TMEM88BA6NKF7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
TMEM88BA6NKF7 KRT17P2-201ENST00000300992 1314 ntBASIC25.22■■□□□ 1.63
TMEM88BA6NKF7 RCN1P1-201ENST00000400413 996 ntBASIC25.22■■□□□ 1.63
TMEM88BA6NKF7 AC053503.5-201ENST00000601508 636 ntBASIC25.22■■□□□ 1.63
TMEM88BA6NKF7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TMEM88BA6NKF7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC25.21■■□□□ 1.63
TMEM88BA6NKF7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
TMEM88BA6NKF7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TMEM88BA6NKF7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TMEM88BA6NKF7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC25.21■■□□□ 1.63
TMEM88BA6NKF7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TMEM88BA6NKF7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TMEM88BA6NKF7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC25.21■■□□□ 1.63
TMEM88BA6NKF7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
TMEM88BA6NKF7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
TMEM88BA6NKF7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
TMEM88BA6NKF7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.21■■□□□ 1.63
TMEM88BA6NKF7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TMEM88BA6NKF7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.21■■□□□ 1.63
TMEM88BA6NKF7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
TMEM88BA6NKF7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC25.2■■□□□ 1.62
TMEM88BA6NKF7 HLA-B-256ENST00000639848 1089 ntBASIC25.2■■□□□ 1.62
TMEM88BA6NKF7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TMEM88BA6NKF7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC25.2■■□□□ 1.62
TMEM88BA6NKF7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TMEM88BA6NKF7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
TMEM88BA6NKF7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TMEM88BA6NKF7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TMEM88BA6NKF7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.19■■□□□ 1.62
TMEM88BA6NKF7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
TMEM88BA6NKF7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC25.19■■□□□ 1.62
TMEM88BA6NKF7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC25.19■■□□□ 1.62
TMEM88BA6NKF7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC25.19■■□□□ 1.62
TMEM88BA6NKF7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC25.19■■□□□ 1.62
TMEM88BA6NKF7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC25.19■■□□□ 1.62
TMEM88BA6NKF7 AC120498.10-201ENST00000621827 505 ntBASIC25.19■■□□□ 1.62
TMEM88BA6NKF7 AL353803.4-201ENST00000565882 1934 ntBASIC25.19■■□□□ 1.62
TMEM88BA6NKF7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TMEM88BA6NKF7 AL121749.1-202ENST00000609313 2153 ntBASIC25.18■■□□□ 1.62
TMEM88BA6NKF7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.18■■□□□ 1.62
TMEM88BA6NKF7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
TMEM88BA6NKF7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.18■■□□□ 1.62
TMEM88BA6NKF7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TMEM88BA6NKF7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
TMEM88BA6NKF7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TMEM88BA6NKF7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC25.18■■□□□ 1.62
TMEM88BA6NKF7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TMEM88BA6NKF7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC25.18■■□□□ 1.62
TMEM88BA6NKF7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMEM88BA6NKF7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.17■■□□□ 1.62
TMEM88BA6NKF7 NME6-213ENST00000451657 871 ntTSL 2 BASIC25.17■■□□□ 1.62
TMEM88BA6NKF7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TMEM88BA6NKF7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC25.17■■□□□ 1.62
TMEM88BA6NKF7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC25.17■■□□□ 1.62
TMEM88BA6NKF7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
TMEM88BA6NKF7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC25.17■■□□□ 1.62
TMEM88BA6NKF7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.17■■□□□ 1.62
TMEM88BA6NKF7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TMEM88BA6NKF7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMEM88BA6NKF7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMEM88BA6NKF7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
TMEM88BA6NKF7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.16■■□□□ 1.62
TMEM88BA6NKF7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC25.16■■□□□ 1.62
TMEM88BA6NKF7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC25.16■■□□□ 1.62
TMEM88BA6NKF7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC25.16■■□□□ 1.62
TMEM88BA6NKF7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
TMEM88BA6NKF7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
TMEM88BA6NKF7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
TMEM88BA6NKF7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 AC087499.1-201ENST00000418141 1075 ntBASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 AC012618.2-201ENST00000428058 849 ntBASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms